8VF1 | pdb_00008vf1


NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose

NAG is a Ligand Of Interest in 8VF1 designated by the RCSB


Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8VF1_NAG_A_702Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8VF1_NAG_A_702Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0WorseGeometryBetterWorseExperiment Data FittingBetter8VF1_NAG_A_702Click to see a 3Delectron density viewof this ligand instance
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Other instances in this entry
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with same target (top 5)
Created with Raphaël 2.3.0
Best-fitted instance in this entry
Created with Raphaël 2.3.0
Best-fitted PDB instances with different target (top 5)
IdentifierRanking for goodness of fit Ranking for geometry Real space R factor Real space correlation coefficient RMSZ-bond-length RMSZ-bond-angleOutliers of bond length Outliers of bond angle Atomic clashesStereochemical errorsModel completenessAverage occupancy
8VF1_NAG_A_702 29% 71% 0.1 0.7570.36 0.73 - 100100%1
8VF1_NAG_B_701 26% 46% 0.143 0.7841.05 1.02 2 120100%1
8VF1_NAG_A_701 8% 75% 0.149 0.6180.28 0.7 - 100100%1
2X9M_NAG_A_1605 68% 60% 0.138 0.9490.55 0.96 - 100100%1
8JR5_NAG_B_702 40% 72% 0.149 0.860.39 0.7 - -10100%1
6PD4_NAG_A_705 39% 74% 0.113 0.8150.31 0.7 - 100100%1
6PDL_NAG_C_701 23% 65% 0.251 0.8720.68 0.66 1 100100%1
6CMI_NAG_B_703 7% 69% 0.165 0.610.38 0.8 - 100100%1
3H0C_NAG_A_794 100% 56% 0.021 0.9950.61 1.08 - 100100%1
5F9W_NAG_A_510 100% 88% 0.023 0.9940.24 0.43 - -00100%1
5LDS_NAG_B_1007 100% 67% 0.022 0.9950.48 0.79 - -00100%1
5O5D_NAG_A_601 100% 65% 0.022 0.9940.32 0.99 - 100100%1
6MUG_NAG_G_629 100% 76% 0.022 0.9940.35 0.58 - -00100%1