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233,249 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Hirokawa, N."

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Search Summary

This query matches 34 Structures.

Refinements

Structure Determination Methodology

experimental (34)

Scientific Name of Source Organism

	Mus musculus (27)
	Sus scrofa (9)
	Homo sapiens (2)

Taxonomy

Eukaryota (34)

Experimental Method

	X-RAY DIFFRACTION (24)
	ELECTRON MICROSCOPY (10)

Polymer Entity Type

Protein (34)

Refinement Resolution (Å)

	1.5 - 2.0 (5)
	2.0 - 2.5 (8)
	2.5 - 3.0 (6)
	3.0 - 3.5 (4)
	3.5 - 4.0 (1)
	> 4.5 (10)

Release Date

	2000 - 2004 (9)
	2005 - 2009 (7)
	2010 - 2014 (3)
	2015 - 2019 (13)
	2020 - 2024 (2)

Enzyme Classification Name

Hydrolases (13)

Symmetry Type

	Asymmetric (28)
	Helical (4)
	Dihedral (3)

SCOP Classification

	Alpha and beta proteins (a/b) (18)
	Artifacts (6)
	Alpha and beta proteins (a+b) (2)
	Low resolution protein structures (1)

AllSelected

1 to 25 of 34 Structures

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1I5S \| pdb_00001i5s	Download File View File

CRYSTAL STRUCTURE OF THE KIF1A MOTOR DOMAIN COMPLEXED WITH MG-ADP

Kikkawa, M., Sablin, E.P., Okada, Y., Yajima, H., Fletterick, R.J., Hirokawa, N.

(2001) Nature 411: 439-445

Released	2001-05-30
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Mus musculus
Macromolecule	KINESIN-LIKE PROTEIN KIF1A (protein)
Unique Ligands	ADP, MG

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1I6I \| pdb_00001i6i	Download File View File

CRYSTAL STRUCTURE OF THE KIF1A MOTOR DOMAIN COMPLEXED WITH MG-AMPPCP

Kikkawa, M., Sablin, E.P., Okada, Y., Yajima, H., Fletterick, R.J., Hirokawa, N.

(2001) Nature 411: 439-445

Released	2001-05-30
Method	X-RAY DIFFRACTION 2 Å
Organisms	Mus musculus
Macromolecule	KINESIN-LIKE PROTEIN KIF1A (protein)
Unique Ligands	ACP, MG, TRS

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1IA0 \| pdb_00001ia0	Download File View File

KIF1A HEAD-MICROTUBULE COMPLEX STRUCTURE IN ATP-FORM

Kikkawa, M., Sablin, E.P., Okada, Y., Yajima, H., Fletterick, R.J., Hirokawa, N.

(2001) Nature 411: 439-445

Released	2002-03-22
Method	ELECTRON MICROSCOPY 15 Å
Organisms	Mus musculus Sus scrofa
Macromolecule	KINESIN-LIKE PROTEIN KIF1A (protein) TUBULIN ALPHA CHAIN (protein) TUBULIN BETA CHAIN (protein)
Unique Ligands	ACP, GDP, GTP, MG, TXL

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1V8J \| pdb_00001v8j	Download File View File

The Crystal Structure of the Minimal Functional Domain of the Microtubule Destabilizer KIF2C Complexed with Mg-ADP

Ogawa, T., Nitta, R., Okada, Y., Hirokawa, N.

(2004) Cell 116: 591-602

Released	2004-03-02
Method	X-RAY DIFFRACTION 3.24 Å
Organisms	Mus musculus
Macromolecule	Kinesin-like protein KIF2C (protein)
Unique Ligands	ADP, MG

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1V8K \| pdb_00001v8k	Download File View File

The Crystal Structure of the Minimal Functional Domain of the Microtubule Destabilizer KIF2C Complexed with Mg-AMPPNP

Ogawa, T., Nitta, R., Okada, Y., Hirokawa, N.

(2004) Cell 116: 591-602

Released	2004-03-02
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Mus musculus
Macromolecule	Kinesin-like protein KIF2C (protein)
Unique Ligands	ANP, MG

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1VFV \| pdb_00001vfv	Download File View File

Crystal Structure of the Kif1A Motor Domain Complexed With Mg-AMPPNP

Nitta, R., Kikkawa, M., Okada, Y., Hirokawa, N.

(2004) Science 305: 678-683

Released	2004-08-10
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Mus musculus
Macromolecule	PROTEIN (Fusion protein consisting of Kinesin-like protein KIF1A, Kinesin heavy chain isoform 5C and A HIS TAG (protein)
Unique Ligands	ANP, MG

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1VFW \| pdb_00001vfw	Download File View File

Crystal Structure of the Kif1A Motor Domain Complexed With Mg-AMPPNP

Nitta, R., Kikkawa, M., Okada, Y., Hirokawa, N.

(2004) Science 305: 678-683

Released	2004-08-10
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Mus musculus
Macromolecule	PROTEIN (Fusion protein consisting of Kinesin-like protein KIF1A, Kinesin heavy chain isoform 5C and A HIS TAG (protein)
Unique Ligands	ANP, MG

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1VFX \| pdb_00001vfx	Download File View File

Crystal Structure of the Kif1A Motor Domain Complexed With ADP-Mg-AlFx

Nitta, R., Kikkawa, M., Okada, Y., Hirokawa, N.

(2004) Science 305: 678-683

Released	2004-08-10
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Mus musculus
Macromolecule	PROTEIN (Fusion protein consisting of Kinesin-like protein KIF1A, Kinesin heavy chain isoform 5C and A HIS TAG (protein)
Unique Ligands	ADP, AF3, MG, TRS

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1VFZ \| pdb_00001vfz	Download File View File

Crystal Structure of the Kif1A Motor Domain Complexed With ADP-Mg-VO4

Nitta, R., Kikkawa, M., Okada, Y., Hirokawa, N.

(2004) Science 305: 678-683

Released	2004-08-10
Method	X-RAY DIFFRACTION 2.24 Å
Organisms	Mus musculus
Macromolecule	PROTEIN (Fusion protein consisting of Kinesin-like protein KIF1A, Kinesin heavy chain isoform 5C and A HIS TAG (protein)
Unique Ligands	ADP, MG, VO4

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2HXF \| pdb_00002hxf	Download File View File

KIF1A head-microtubule complex structure in amppnp-form

Kikkawa, M., Hirokawa, N.

(2006) EMBO J 25: 4187-4194

Released	2006-10-10
Method	ELECTRON MICROSCOPY 10 Å
Organisms	Mus musculus Sus scrofa
Macromolecule	Kinesin-like protein KIF1A (protein) Tubulin alpha chain (protein) Tubulin beta chain (protein)
Unique Ligands	ANP, GDP, GTP, MG, TA1

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2HXH \| pdb_00002hxh	Download File View File

KIF1A head-microtubule complex structure in adp-form

Kikkawa, M., Hirokawa, N.

(2006) EMBO J 25: 4187-4194

Released	2006-10-10
Method	ELECTRON MICROSCOPY 11 Å
Organisms	Mus musculus Sus scrofa
Macromolecule	Kinesin-like protein KIF1A (protein) Tubulin alpha chain (protein) Tubulin beta chain (protein)
Unique Ligands	ADP, GDP, GTP, MG, TA1

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2ZFI \| pdb_00002zfi	Download File View File

Crystal Structure of the Kif1A Motor Domain Before Mg Release

Nitta, R., Okada, Y., Hirokawa, N.

(2008) Nat Struct Mol Biol 15: 1067-1075

Released	2008-09-23
Method	X-RAY DIFFRACTION 1.55 Å
Organisms	Mus musculus
Macromolecule	Kinesin-like protein KIF1A, Kinesin heavy chain isoform 5C (protein)
Unique Ligands	ADP, MG

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2ZFJ \| pdb_00002zfj	Download File View File

Crystal Structure of the Kif1A Motor Domain during Mg release: Mg-releasing Transition-1

Nitta, R., Okada, Y., Hirokawa, N.

(2008) Nat Struct Mol Biol 15: 1067-1075

Released	2008-09-23
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Mus musculus
Macromolecule	Kinesin-like protein KIF1A, Kinesin heavy chain isoform 5C (protein)
Unique Ligands	ADP, MG

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2ZFK \| pdb_00002zfk	Download File View File

Crystal Structure of the Kif1A Motor Domain during Mg release: Mg-releasing Transition-2

Nitta, R., Okada, Y., Hirokawa, N.

(2008) Nat Struct Mol Biol 15: 1067-1075

Released	2008-09-23
Method	X-RAY DIFFRACTION 3.61 Å
Organisms	Mus musculus
Macromolecule	Kinesin-like protein KIF1A, Kinesin heavy chain isoform 5C (protein)
Unique Ligands	ADP, MG, TRS

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2ZFL \| pdb_00002zfl	Download File View File

Crystal Structure of the Kif1A Motor Domain during Mg release: Mg-releasing Transition-3

Nitta, R., Okada, Y., Hirokawa, N.

(2008) Nat Struct Mol Biol 15: 1067-1075

Released	2008-09-23
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Mus musculus
Macromolecule	Kinesin-like protein KIF1A, Kinesin heavy chain isoform 5C (protein)
Unique Ligands	ADP

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2ZFM \| pdb_00002zfm	Download File View File

Crystal Structure of the Kif1A Motor Domain After Mg Release

Nitta, R., Okada, Y., Hirokawa, N.

(2008) Nat Struct Mol Biol 15: 1067-1075

Released	2008-09-23
Method	X-RAY DIFFRACTION 2.31 Å
Organisms	Mus musculus
Macromolecule	Kinesin-like protein KIF1A, Kinesin heavy chain isoform 5C (protein)
Unique Ligands	ADP

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3J6H \| pdb_00003j6h	Download File View File

Nucleotide-free Kinesin motor domain complexed with GMPCPP-microtubule

Morikawa, M., Yajima, H., Nitta, R., Inoue, S., Ogura, T., Sato, C., Hirokawa, N.

(2015) EMBO J

Released	2015-04-01
Method	ELECTRON MICROSCOPY 8.1 Å
Organisms	Mus musculus Sus scrofa
Macromolecule	Kinesin heavy chain isoform 5C (protein) Tubulin alpha-1A chain (protein) Tubulin beta chain (protein)
Unique Ligands	G2P, GTP, MG, SO4

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3J7I \| pdb_00003j7i	Download File View File

Structure of alpha- and beta- tubulin in GMPCPP-microtubules

Yajima, H., Ogura, T., Nitta, R., Okada, Y., Sato, C., Hirokawa, N.

(2012) J Cell Biol 198: 315-322

Released	2014-12-10
Method	ELECTRON MICROSCOPY 8.9 Å
Organisms	Sus scrofa
Macromolecule	Tubulin alpha-1A chain (protein) Tubulin beta chain (protein)
Unique Ligands	GTP, MG