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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Lin, F."

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Search Summary

This query matches 13 Structures.

Refinements

Structure Determination Methodology

experimental (13)

Scientific Name of Source Organism

	Homo sapiens (11)
	Echovirus E7 (2)
	Agrocybe pediades (1)
	Haemophilus influenzae (1)
	synthetic construct (1)

Taxonomy

	Eukaryota (12)
	Riboviria (2)
	Bacteria (1)
	other sequences (1)

Experimental Method

	ELECTRON MICROSCOPY (7)
	SOLUTION NMR (3)
	X-RAY DIFFRACTION (3)

Polymer Entity Type

	Protein (13)
	DNA (2)

Refinement Resolution (Å)

	1.5 - 2.0 (2)
	2.0 - 2.5 (1)
	3.5 - 4.0 (2)
	> 4.5 (5)

Release Date

	2000 - 2004 (2)
	2005 - 2009 (6)
	2010 - 2014 (1)
	2015 - 2019 (1)
	2020 - 2024 (3)

Enzyme Classification Name

	Transferases (3)
	Lyases (1)

Symmetry Type

	Asymmetric (9)
	Cyclic (2)
	Icosahedral (2)

SCOP Classification

	Artifacts (4)
	Low resolution protein structures (1)
	Small proteins (4)
	Alpha and beta proteins (a/b) (1)
	Alpha and beta proteins (a+b) (1)

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1 to 13 of 13 Structures

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1M11 \| pdb_00001m11	Download File View File

structural model of human decay-accelerating factor bound to echovirus 7 from cryo-electron microscopy

He, Y., Lin, F., Chipman, P.R., Bator, C.M., Baker, T.S., Shoham, M., Kuhn, R.J., Medof, M.E., Rossmann, M.G.

(2002) Proc Natl Acad Sci U S A 99: 10325-10329

Released	2002-08-28
Method	ELECTRON MICROSCOPY 16 Å
Organisms	Echovirus E7 Homo sapiens
Macromolecule	COAT PROTEIN VP1 (protein) COAT PROTEIN VP2 (protein) COAT PROTEIN VP3 (protein) decay-accelerating factor (protein)

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1NWV \| pdb_00001nwv	Download File View File

SOLUTION STRUCTURE OF A FUNCTIONALLY ACTIVE COMPONENT OF DECAY ACCELERATING FACTOR

Uhrinova, S., Lin, F., Ball, G., Bromek, K., Uhrin, D., Medof, M.E., Barlow, P.N.

(2003) Proc Natl Acad Sci U S A 100: 4718-4723

Released	2003-04-22
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Complement decay-accelerating factor (protein)

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1YZ3 \| pdb_00001yz3	Download File View File

Structure of human pnmt complexed with cofactor product adohcy and inhibitor SK&F 64139

Wu, Q., Gee, C.L., Lin, F., Martin, J.L., Grunewald, G.L., McLeish, M.J.

(2005) J Med Chem 48: 7243-7252

Released	2006-02-07
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Homo sapiens
Macromolecule	Phenylethanolamine N-methyltransferase (protein)
Unique Ligands	SAH, SKA

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2AIZ \| pdb_00002aiz	Download File View File

Solution structure of peptidoglycan associated lipoprotein from Haemophilus influenza bound to UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

Parsons, L.M., Lin, F., Orban, J., Structure 2 Function Project (S2F)

(2006) Biochemistry 45: 2122-2128

Released	2006-03-14
Method	SOLUTION NMR
Organisms	Haemophilus influenzae synthetic construct
Macromolecule	L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine (protein) Outer membrane protein P6 (Fragment) (protein)
Unique Ligands	AMU, UDP

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2CH0 \| pdb_00002ch0	Download File View File

Solution structure of the human MAN1 C-terminal domain (residues 655- 775)

Caputo, S., Couprie, J., Duband-Goulet, I., Lin, F., Braud, S., Gondry, M., Worman, H.J., Gilquin, B., Zinn-Justin, S.

(2006) J Biological Chem 281: 18208-18215

Released	2006-05-16
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	INNER NUCLEAR MEMBRANE PROTEIN MAN1 (protein)

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2QZD \| pdb_00002qzd	Download File View File

Fitted structure of SCR4 of DAF into cryoEM density

Hafenstein, S., Bowman, V.D., Chipman, P.R., Bator Kelly, C.M., Lin, F., Medof, M.E., Rossmann, M.G.

(2007) J Virol 81: 12927-12935

Released	2007-10-30
Method	ELECTRON MICROSCOPY 14 Å
Organisms	Homo sapiens
Macromolecule	Complement decay-accelerating factor (protein)

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2QZF \| pdb_00002qzf	Download File View File

SCR1 of DAF from 1ojv fitted into cryoEM density

Hafenstein, S., Bowman, V.D., Chipman, P.R., Bator Kelly, C.M., Lin, F., Medof, M.E., Rossmann, M.G.

(2007) J Virol 81: 12927-12935

Released	2007-10-30
Method	ELECTRON MICROSCOPY 14 Å
Organisms	Homo sapiens
Macromolecule	Complement decay-accelerating factor (protein)

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2QZH \| pdb_00002qzh	Download File View File

SCR2/3 of DAF from the NMR structure 1nwv fitted into a cryoEM reconstruction of CVB3-RD complexed with DAF

Hafenstein, S., Bowman, V.D., Chipman, P.R., Bator Kelly, C.M., Lin, F., Medof, M.E., Rossmann, M.G.

(2007) J Virol 81: 12927-12935

Released	2007-10-30
Method	ELECTRON MICROSCOPY 14 Å
Organisms	Homo sapiens
Macromolecule	Complement decay-accelerating factor (protein)

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3IYP \| pdb_00003iyp	Download File View File

The Interaction of Decay-accelerating Factor with Echovirus 7

Plevka, P., Hafenstein, S., Zhang, Y., Harris, K.G., Cifuente, J.O., Bowman, V.D., Chipman, P.R., Lin, F., Medof, D.E., Bator, C.M., Rossmann, M.G.

(2010) J Virol 84: 12665-12674

Released	2010-11-24
Method	ELECTRON MICROSCOPY 7.2 Å
Organisms	Echovirus E7 Homo sapiens
Macromolecule	Capsid protein (protein) Complement decay-accelerating factor (protein) Polyprotein (protein)
Unique Ligands	DAO

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6F4U \| pdb_00006f4u	Download File View File

Crystal structure of reactive loop cleaved kallistatin at 1.9 angstrom resolution

Zhou, A., Wei, Z., Lin, F.

To be published

Released	2018-12-12
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Kallistatin (protein)
Unique Ligands	CL, EDO, GOL, NA

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8GY0 \| pdb_00008gy0	Download File View File

Agrocybe pediades linalool sunthase (Ap.LS)

Rehka, T., Sharma, D., Lin, F., Lim, C., Choong, Y.K., Chacko, J., Zhang, C.

(2023) ACS Catal 13: 4949-4959

Released	2023-04-12
Method	X-RAY DIFFRACTION 1.988 Å
Organisms	Agrocybe pediades
Macromolecule	Terpene synthase (protein)

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8JHF \| pdb_00008jhf	Download File View File

Native SUV420H1 bound to 167-bp nucleosome

Lin, F., Li, W.

(2023) Cell Discov 9: 120-120

Released	2023-11-15
Method	ELECTRON MICROSCOPY 3.68 Å
Organisms	Homo sapiens
Macromolecule	Unique protein chains: 5 Unique nucleic acid chains: 2
Unique Ligands	SAM, ZN

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8JHG \| pdb_00008jhg	Download File View File

Native SUV420H1 bound to 167-bp nucleosome

Lin, F., Li, W.

(2023) Cell Discov 9: 120-120

Released	2023-11-22
Method	ELECTRON MICROSCOPY 3.58 Å
Organisms	Homo sapiens
Macromolecule	Unique protein chains: 5 Unique nucleic acid chains: 2
Unique Ligands	SAM, ZN

1 to 13 of 13 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

1M11 | pdb_00001m11

structural model of human decay-accelerating factor bound to echovirus 7 from cryo-electron microscopy

1NWV | pdb_00001nwv

SOLUTION STRUCTURE OF A FUNCTIONALLY ACTIVE COMPONENT OF DECAY ACCELERATING FACTOR

1YZ3 | pdb_00001yz3

Structure of human pnmt complexed with cofactor product adohcy and inhibitor SK&F 64139

2AIZ | pdb_00002aiz

Solution structure of peptidoglycan associated lipoprotein from Haemophilus influenza bound to UDP-N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine

2CH0 | pdb_00002ch0

Solution structure of the human MAN1 C-terminal domain (residues 655- 775)

2QZD | pdb_00002qzd

Fitted structure of SCR4 of DAF into cryoEM density

2QZF | pdb_00002qzf

SCR1 of DAF from 1ojv fitted into cryoEM density

2QZH | pdb_00002qzh

SCR2/3 of DAF from the NMR structure 1nwv fitted into a cryoEM reconstruction of CVB3-RD complexed with DAF

3IYP | pdb_00003iyp

The Interaction of Decay-accelerating Factor with Echovirus 7

6F4U | pdb_00006f4u

Crystal structure of reactive loop cleaved kallistatin at 1.9 angstrom resolution

8GY0 | pdb_00008gy0

Agrocybe pediades linalool sunthase (Ap.LS)

8JHF | pdb_00008jhf

Native SUV420H1 bound to 167-bp nucleosome

8JHG | pdb_00008jhg

Native SUV420H1 bound to 167-bp nucleosome

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1M11 | pdb_00001m11

1NWV | pdb_00001nwv

1YZ3 | pdb_00001yz3

2AIZ | pdb_00002aiz

2CH0 | pdb_00002ch0

2QZD | pdb_00002qzd

2QZF | pdb_00002qzf

2QZH | pdb_00002qzh

3IYP | pdb_00003iyp

6F4U | pdb_00006f4u

8GY0 | pdb_00008gy0

8JHF | pdb_00008jhf

8JHG | pdb_00008jhg