RCSB PDB: Search

1T3H \| pdb_00001t3h	Download File View File

X-ray Structure of Dephospho-CoA Kinase from E. coli Norteast Structural Genomics Consortium Target ER57

Kuzin, A.P., Chen, Y., Forouhar, F., Edstrom, W., Benach, J., Vorobiev, S., Acton, T., Shastry, R., Ma, L.-C., Xia, R., Montelione, G., Tong, L., Hunt, J., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2004-05-11
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Escherichia coli
Macromolecule	Dephospho-CoA kinase (protein)
Unique Ligands	SO4

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1YDM \| pdb_00001ydm	Download File View File

X-Ray structure of Northeast Structural Genomics target SR44

Kuzin, A.P., Jianwei, S., Vorobiev, S., Acton, T., Xia, R., Ma, L.-C., Montelione, G., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2005-01-18
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Bacillus subtilis
Macromolecule	Hypothetical protein yqgN (protein)
Unique Ligands	SO4

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2P3Y \| pdb_00002p3y	Download File View File

Crystal structure of VPA0735 from Vibrio parahaemolyticus. NorthEast Structural Genomics target VpR109

Seetharaman, J., Neely, H., Forouhar, F., Wang, D., Fang, Y., Cunningham, K., Ma, L.-C., Xia, R., Liu, J., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2007-03-27
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Vibrio parahaemolyticus RIMD 2210633
Macromolecule	Hypothetical protein VPA0735 (protein)

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2PIF \| pdb_00002pif	Download File View File

Crystal structure of UPF0317 protein PSPTO_5379 from Pseudomonas syringae pv. tomato. NorthEast Structural Genomics target PsR181

Seetharaman, J., Abashidze, M., Forouhar, F., Wang, D., Fang, Y., Cunningham, K., Ma, L.-C., Xia, R., Liu, J., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2007-05-01
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Pseudomonas syringae pv. tomato str. DC3000
Macromolecule	UPF0317 protein PSPTO_5379 (protein)

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2PIH \| pdb_00002pih	Download File View File

Crystal structure of Protein ymcA from Bacillus subtilis, NorthEast Structural Genomics target SR375

Seetharaman, J., Abashidze, M., Forouhar, F., Wang, D., Fang, Y., Cunningham, K., Ma, L.-C., Xia, R., Liu, J., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2007-05-01
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Bacillus subtilis
Macromolecule	Protein ymcA (protein)

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2PSB \| pdb_00002psb	Download File View File

Crystal structure of YerB protein from Bacillus subtilis. NorthEast Structural Genomics target SR586

Seetharaman, J., Chen, Y., Forouhar, F., Wang, D., Fang, Y., Cunningham, K., Ma, L.-C., Xia, R., Liu, J., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2007-05-15
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Bacillus subtilis
Macromolecule	YerB protein (protein)

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2QGZ \| pdb_00002qgz	Download File View File

Crystal structure of a putative primosome component from Streptococcus pyogenes serotype M3. Northeast Structural Genomics target DR58

Seetharaman, J., Chen, Y., Wang, D., Fang, Y., Cunningham, K., Ma, L.-C., Xia, R., Liu, J., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2007-07-24
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Streptococcus pyogenes serotype M3
Macromolecule	Putative primosome component (protein)
Unique Ligands	PO4

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2RJB \| pdb_00002rjb	Download File View File

Crystal structure of uncharacterized protein YdcJ (SF1787) from Shigella flexneri which includes domain DUF1338. Northeast Structural Genomics Consortium target SfR276

Seetharaman, J., Chen, Y., Wang, D., Fang, Y., Cunningham, K., Ma, L.-C., Xia, R., Liu, J., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Tong, L., Hunt, J.F., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2007-10-30
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Shigella flexneri
Macromolecule	Uncharacterized protein (protein)
Unique Ligands	ZN

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3BU2 \| pdb_00003bu2	Download File View File

Crystal structure of a tRNA-binding protein from Staphylococcus saprophyticus subsp. saprophyticus. Northeast Structural Genomics Consortium target SyR77

Seetharaman, J., Su, M., Forouhar, F., Wang, D., Fang, Y., Cunningham, K., Ma, L.-C., Xia, R., Liu, J., Baran, M.C., Acton, T.B., Rost, B., Montelione, G.T., Hunt, J.F., Tong, L., Northeast Structural Genomics Consortium (NESG)

To be published

Released	2008-01-22
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 = NCTC 7292
Macromolecule	Putative tRNA-binding protein (protein)

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6UH3 \| pdb_00006uh3	Download File View File

Crystal structure of bacterial heliorhodopsin 48C12

Lu, Y., Zhou, X.E., Gao, X., Xia, R., Xu, Z., Wang, N., Leng, Y., Melcher, K., Xu, H.E., He, Y.

(2020) Cell Res 30: 88-90

Released	2019-12-04
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Actinomycetes bacterium
Macromolecule	Heliorhodopsin (protein)
Unique Ligands	PEG, PGE, PLM, RET

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7DFL \| pdb_00007dfl	Download File View File

Cryo-EM structure of histamine H1 receptor Gq complex

He, Y., Xia, R., Wang, N., Xu, Z.

(2021) Nat Commun 12: 2086-2086

Released	2021-03-31
Method	ELECTRON MICROSCOPY 3.3 Å
Organisms	Homo sapiens
Macromolecule	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (protein) Guanine nucleotide-binding protein G(q) subunit alpha (protein) Histamine H1 receptor (protein) scFv16 (protein)
Unique Ligands	HSM

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7EO2 \| pdb_00007eo2	Download File View File

Cryo-EM of Sphingosine 1-phosphate receptor 1 / Gi complex bound to FTY720p

He, Y., Xu, Z., Ikuta, T.

(2022) Nat Chem Biol 18: 281-288

Released	2022-01-05
Method	ELECTRON MICROSCOPY 2.89 Å
Organisms	Homo sapiens
Macromolecule	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (protein) Guanine nucleotide-binding protein G(i) subunit alpha-1 (protein) Sphingosine 1-phosphate receptor 1 (protein) scFv16 (protein)
Unique Ligands	J89

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7EO4 \| pdb_00007eo4	Download File View File

Cryo-EM of Sphingosine 1-phosphate receptor 1 / Gi complex bound to BAF312

He, Y., Xu, Z., Ikuta, T., Inoue, A.

(2022) Nat Chem Biol 18: 281-288

Released	2022-01-05
Method	ELECTRON MICROSCOPY 2.86 Å
Organisms	Homo sapiens
Macromolecule	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (protein) Guanine nucleotide-binding protein G(i) subunit alpha-1 (protein) Sphingosine 1-phosphate receptor 1 (protein) scFv16 (protein)
Unique Ligands	J8C

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7EP9 \| pdb_00007ep9	Download File View File

The structure of carboxypeptidase from Fusobacterium nucleatum

Wang, X., Jiang, Y.L.

(2021) Acta Crystallogr D Struct Biol 77: 1554-1563

Released	2021-10-27
Method	X-RAY DIFFRACTION 2.604 Å
Organisms	Fusobacterium nucleatum
Macromolecule	S9 family peptidase (protein)

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7WF7 \| pdb_00007wf7	Download File View File

Cryo-EM of Sphingosine 1-phosphate receptor 1 / Gi complex bound to S1P

He, Y., Xu, Z.

(2022) Nat Chem Biol 18: 281-288

Released	2022-01-05
Method	ELECTRON MICROSCOPY 3.4 Å
Organisms	Homo sapiens
Macromolecule	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (protein) Guanine nucleotide-binding protein G(i) subunit alpha-1 (protein) Sphingosine 1-phosphate receptor 1 (protein) scFv16 (protein)
Unique Ligands	S1P

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7WXU \| pdb_00007wxu	Download File View File

GPR110/Gq complex

He, Y., Zhu, X.

(2022) Nat Commun 13: 5513-5513

Released	2022-09-28
Method	ELECTRON MICROSCOPY 2.85 Å
Organisms	Homo sapiens Lama glama
Macromolecule	Adhesion G-protein coupled receptor F1 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (protein) NB35 (protein) engineered mini Galpha-Q subunit (protein)

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7WXW \| pdb_00007wxw	Download File View File

GPR110/Gs complex

He, Y., Zhu, X.

(2022) Nat Commun 13: 5513-5513

Released	2022-09-28
Method	ELECTRON MICROSCOPY 2.84 Å
Organisms	Homo sapiens Lama glama
Macromolecule	Adhesion G-protein coupled receptor F1 (protein) Engineered mini Galpha-s subunit (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (protein) NB35 (protein)

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7WY0 \| pdb_00007wy0	Download File View File

GPR110/G13 complex

He, Y., Zhu, X.

(2022) Nat Commun 13: 5513-5513

Released	2022-09-28
Method	ELECTRON MICROSCOPY 2.83 Å
Organisms	Homo sapiens
Macromolecule	Adhesion G-protein coupled receptor F1 (protein) Engineered G alpha 13 subunit (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (protein) scFv16 (protein)

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7WY5 \| pdb_00007wy5	Download File View File

ADGRL3/Gq complex

He, Y., Qian, Y.

(2022) Mol Cell 82: 4340-4352.e6

Released	2022-10-26
Method	ELECTRON MICROSCOPY 2.83 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (protein) Isoform 3 of Adhesion G protein-coupled receptor L3 (protein) NB35 (protein) engineered mini G alpha q subunit (protein)

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7WY8 \| pdb_00007wy8	Download File View File

ADGRL3/Gs complex

He, Y., Qian, Y.

(2022) Mol Cell 82: 4340-4352.e6

Released	2022-10-26
Method	ELECTRON MICROSCOPY 2.83 Å
Organisms	Homo sapiens Lama glama Mus musculus
Macromolecule	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (protein) Isoform 3 of Adhesion G protein-coupled receptor L3 (protein) NB35 (protein) engineered mini G alpha s subunit (protein)

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7WYB \| pdb_00007wyb	Download File View File

ADGRL3/Gi complex

He, Y., Qian, Y.

(2022) Mol Cell 82: 4340-4352.e6

Released	2022-10-26
Method	ELECTRON MICROSCOPY 2.97 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (protein) Guanine nucleotide-binding protein G(i) subunit alpha-1 (protein) Isoform 3 of Adhesion G protein-coupled receptor L3 (protein) scFv16 (protein)

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7WZ7 \| pdb_00007wz7	Download File View File

GPR110/G12 complex

He, Y., Zhu, X.

(2022) Nat Commun 13: 5513-5513

Released	2022-09-28
Method	ELECTRON MICROSCOPY 2.83 Å
Organisms	Homo sapiens
Macromolecule	Adhesion G-protein coupled receptor F1 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (protein) engineered G alpha 12 subunit (protein) scFv16 (protein)

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7X10 \| pdb_00007x10	Download File View File

ADGRL3/miniG12 complex

He, Y., Qian, Y.

(2022) Mol Cell 82: 4340-4352.e6

Released	2022-11-09
Method	ELECTRON MICROSCOPY 2.93 Å
Organisms	Homo sapiens Mus musculus
Macromolecule	Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (protein) Isoform 3 of Adhesion G protein-coupled receptor L3 (protein) engineered G alpha 12 subunit (protein) scFv16 (protein)

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7X2V \| pdb_00007x2v	Download File View File

GPR110/Gi complex

He, Y., Zhu, X.

(2022) Nat Commun 13: 5513-5513

Released	2022-09-28
Method	ELECTRON MICROSCOPY 3.09 Å
Organisms	Homo sapiens
Macromolecule	Adhesion G-protein coupled receptor F1 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (protein) Guanine nucleotide-binding protein G(i) subunit alpha-1 (protein) scFv16 (protein)

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7XV3 \| pdb_00007xv3	Download File View File

Cryo-EM structure of LPS-bound GPR174 in complex with Gs protein

He, Y., Liang, J.

(2023) Nat Commun 14: 1012-1012

Released	2023-02-15
Method	ELECTRON MICROSCOPY 2.76 Å
Organisms	Homo sapiens Lama glama
Macromolecule	Engineered G protein subunit S (mini-Gs) (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(O) subunit gamma-2 (protein) Guanine nucleotide-binding protein G(I)/G(S)/G(T) subunit beta-1 (protein) Nb35 (protein) Probable G-protein coupled receptor 174 (protein)
Unique Ligands	WJS

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1T3H | pdb_00001t3h

1YDM | pdb_00001ydm

2P3Y | pdb_00002p3y

2PIF | pdb_00002pif

2PIH | pdb_00002pih

2PSB | pdb_00002psb

2QGZ | pdb_00002qgz

2RJB | pdb_00002rjb

3BU2 | pdb_00003bu2

6UH3 | pdb_00006uh3

7DFL | pdb_00007dfl

7EO2 | pdb_00007eo2

7EO4 | pdb_00007eo4

7EP9 | pdb_00007ep9

7WF7 | pdb_00007wf7

7WXU | pdb_00007wxu

7WXW | pdb_00007wxw

7WY0 | pdb_00007wy0

7WY5 | pdb_00007wy5

7WY8 | pdb_00007wy8

7WYB | pdb_00007wyb

7WZ7 | pdb_00007wz7

7X10 | pdb_00007x10

7X2V | pdb_00007x2v

7XV3 | pdb_00007xv3