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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Structure Author = "Vonrhein, C."

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Search Summary

This query matches 64 Structures.

Refinements

Structure Determination Methodology

experimental (64)

Scientific Name of Source Organism

	Homo sapiens (16)
	Bovine viral diarrhea virus 1-CP7 (9)
	Geobacillus stearothermophilus (7)
	Classical swine fever virus (5)
	Acidianus ambivalens (2)
	Archaeoglobus fulgidus (2)
	Escherichia coli (2)
	Escherichia coli BL21(DE3) (2)
	Influenza C virus (C/Johannesburg/1/66) (2)
	Severe acute respiratory syndrome-related coronavirus (2)

More...

Taxonomy

	Riboviria (21)
	Eukaryota (19)
	Bacteria (18)
	Archaea (7)
	Eukaryota (eukaryotes) (2)
	other sequences (1)

Experimental Method

X-RAY DIFFRACTION (64)

Polymer Entity Type

	Protein (64)
	RNA (5)
	DNA (1)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (7)
	2.0 - 2.5 (19)
	2.5 - 3.0 (18)
	3.0 - 3.5 (14)
	3.5 - 4.0 (1)
	4.0 - 4.5 (3)

Release Date

	1995 - 1999 (2)
	2000 - 2004 (11)
	2005 - 2009 (19)
	2010 - 2014 (22)
	2015 - 2019 (10)

Enzyme Classification Name

	Oxidoreductases (11)
	Hydrolases (17)
	Transferases (8)
	Ligases (6)
	Lyases (3)
	Translocases (1)

Membrane Protein Annotation

	MemProtMD (2)
	OPM (2)
	PDBTM (2)
	mpstruc (2)

Symmetry Type

	Asymmetric (40)
	Cyclic (25)
	Dihedral (5)

SCOP Classification

	Alpha and beta proteins (a/b) (15)
	Alpha and beta proteins (a+b) (6)
	All beta proteins (5)
	All alpha proteins (9)
	Peptides (2)
	Artifacts (3)
	Multi-domain proteins (alpha and beta) (1)
	Small proteins (1)

AllSelected

1 to 25 of 64 Structures

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1CJC \| pdb_00001cjc	Download File View File

STRUCTURE OF ADRENODOXIN REDUCTASE OF MITOCHONDRIAL P450 SYSTEMS

Ziegler, G.A., Vonrhein, C., Schulz, G.E.

(1999) J Mol Biology 289: 981-990

Released	1999-04-30
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Bos taurus
Macromolecule	PROTEIN (ADRENODOXIN REDUCTASE) (protein)
Unique Ligands	FAD

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1G29 \| pdb_00001g29	Download File View File

MALK

Diederichs, K., Diez, J., Greller, G., Mueller, C., Breed, J., Schnell, C., Vonrhein, C., Boos, W., Welte, W.

(2000) EMBO J 19: 5951-5961

Released	2000-12-06
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Thermococcus litoralis
Macromolecule	MALTOSE TRANSPORT PROTEIN MALK (protein)
Unique Ligands	CL, DIO, MG, NA, NH4, POP

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1J5E \| pdb_00001j5e	Download File View File

Structure of the Thermus thermophilus 30S Ribosomal Subunit

Wimberly, B.T., Brodersen, D.E., Clemons Jr., W.M., Morgan-Warren, R., Carter, A.P., Vonrhein, C., Hartsch, T., Ramakrishnan, V.

(2000) Nature 407: 327-339

Released	2002-04-12
Method	X-RAY DIFFRACTION 3.05 Å
Organisms	Thermus thermophilus
Macromolecule	Unique protein chains: 20 Unique nucleic acid chains: 1
Unique Ligands	UNX, ZN

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1LF1 \| pdb_00001lf1	Download File View File

Crystal Structure of Cel5 from Alkalophilic Bacillus sp.

Shaw, A., Bott, R., Vonrhein, C., Bricogne, G., Power, S., Day, A.G.

(2002) J Mol Biology 320: 303-309

Released	2002-07-03
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Bacillus subtilis
Macromolecule	Cel5 (protein)

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1M83 \| pdb_00001m83	Download File View File

Crystal Structure of Tryptophanyl-tRNA Synthetase Complexed with ATP in a Closed, Pre-transition State Conformation

Retailleau, P., Huang, X., Yin, Y., Hu, M., Weinreb, V., Vachette, P., Vonrhein, C., Bricogne, G., Roversi, P., Ilyin, V., Carter Jr., C.W.

(2003) J Mol Biology 325: 39-63

Released	2002-12-18
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Geobacillus stearothermophilus
Macromolecule	Tryptophan-tRNA ligase (protein)
Unique Ligands	ATP, GOL, MG

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1MAU \| pdb_00001mau	Download File View File

Crystal structure of Tryptophanyl-tRNA Synthetase Complexed with ATP and Tryptophanamide in a Pre-Transition state Conformation

Retailleau, P., Huang, X., Yin, Y., Hu, M., Weinreb, V., Vachette, P., Vonrhein, C., Bricogne, G., Roversi, P., Ilyin, V., Carter Jr., C.W.

(2003) J Mol Biology 325: 39-63

Released	2003-01-07
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Geobacillus stearothermophilus
Macromolecule	tryptophan-tRNA ligase (protein)
Unique Ligands	ATP, CIT, GOL, LTN, MG, NA

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1MAW \| pdb_00001maw	Download File View File

Crystal Structure of Tryptophanyl-tRNA Synthetase Complexed with ATP in an Open Conformation

Retailleau, P., Huang, X., Yin, Y., Hu, M., Weinreb, V., Vachette, P., Vonrhein, C., Bricogne, G., Roversi, P., Ilyin, V., Carter Jr., C.W.

(2003) J Mol Biology 325: 39-63

Released	2003-01-07
Method	X-RAY DIFFRACTION 3 Å
Organisms	Geobacillus stearothermophilus
Macromolecule	TRYPTOPHAN-TRNA LIGASE (protein)
Unique Ligands	ATP

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1MB2 \| pdb_00001mb2	Download File View File

Crystal Structure of Tryptophanyl-tRNA Synthetase Complexed with Tryptophan in an Open Conformation

Retailleau, P., Huang, X., Yin, Y., Hu, M., Weinreb, V., Vachette, P., Vonrhein, C., Bricogne, G., Roversi, P., Ilyin, V., Carter Jr., C.W.

(2003) J Mol Biology 325: 39-63

Released	2003-01-07
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Geobacillus stearothermophilus
Macromolecule	TRYPTOPHAN-TRNA LIGASE (protein)
Unique Ligands	TRP

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1NKS \| pdb_00001nks	Download File View File

ADENYLATE KINASE FROM SULFOLOBUS ACIDOCALDARIUS

Vonrhein, C., Schulz, G.E.

(1998) J Mol Biology 282: 167-179

Released	1998-12-09
Method	X-RAY DIFFRACTION 2.57 Å
Organisms	Sulfolobus acidocaldarius
Macromolecule	ADENYLATE KINASE (protein)
Unique Ligands	ADP, AMP

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1SYQ \| pdb_00001syq	Download File View File

Human vinculin head domain VH1, residues 1-258, in complex with human talin's vinculin binding site 1, residues 607-636

Izard, T., Vonrhein, C.

(2004) J Biological Chem 279: 27667-27678

Released	2004-07-20
Method	X-RAY DIFFRACTION 2.42 Å
Organisms	Homo sapiens
Macromolecule	Talin 1 (protein) vinculin isoform VCL (protein)

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1TR2 \| pdb_00001tr2	Download File View File

Crystal structure of human full-length vinculin (residues 1-1066)

Borgon, R.A., Vonrhein, C., Bricogne, G., Bois, P.R., Izard, T.

(2004) Structure 12: 1189-1197

Released	2005-11-15
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Homo sapiens
Macromolecule	VINCULIN ISOFORM 1 (protein)

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1W0E \| pdb_00001w0e	Download File View File

Crystal structure of human cytochrome P450 3A4

Williams, P.A., Cosme, J., Vinkovic, D.M., Ward, A., Angove, H.C., Day, P.J., Vonrhein, C., Tickle, I.J., Jhoti, H.

(2004) Science 305: 683

Released	2004-07-22
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Homo sapiens
Macromolecule	CYTOCHROME P450 3A4 (protein)
Unique Ligands	HEM

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1W0F \| pdb_00001w0f	Download File View File

Crystal structure of human cytochrome P450 3A4

Williams, P.A., Cosme, J., Vinkovic, D.M., Ward, A., Angove, H.C., Day, P.J., Vonrhein, C., Tickle, I.J., Jhoti, H.

(2004) Science 305: 683

Released	2004-07-22
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Homo sapiens
Macromolecule	CYTOCHROME P450 3A4 (protein)
Unique Ligands	HEM, STR

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1W0G \| pdb_00001w0g	Download File View File

Crystal structure of human cytochrome P450 3A4

Williams, P.A., Cosme, J., Vinkovic, D.M., Ward, A., Angove, H.C., Day, P.J., Vonrhein, C., Tickle, I.J., Jhoti, H.

(2004) Science 305: 683

Released	2004-07-22
Method	X-RAY DIFFRACTION 2.73 Å
Organisms	Homo sapiens
Macromolecule	CYTOCHROME P450 3A4 (protein)
Unique Ligands	HEM, MYT

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2B0J \| pdb_00002b0j	Download File View File

The crystal structure of the apoenzyme of the iron-sulfur-cluster-free hydrogenase (Hmd)

Pilak, O., Mamat, B., Vogt, S., Hagemeier, C.H., Thauer, R.K., Shima, S., Vonrhein, C., Warkentin, E., Ermler, U.

(2006) J Mol Biology 358: 798-809

Released	2006-04-18
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Methanocaldococcus jannaschii
Macromolecule	5,10-methenyltetrahydromethanopterin hydrogenase (protein)

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2F5I \| pdb_00002f5i	Download File View File

X-ray structure of spermidine/spermine N1-acetyltransferase (SAT) from Homo sapiens

Zhu, Y.Q., Zhu, D.Y., Vonrhein, C., Wang, D.C.

(2006) Proteins 63: 1127-1131

Released	2005-12-06
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Homo sapiens
Macromolecule	Diamine acetyltransferase 1 (protein)

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2IX0 \| pdb_00002ix0	Download File View File

RNase II

Frazao, C., Mcvey, C.E., Amblar, M., Barbas, A., Vonrhein, C., Arraiano, C.M., Carrondo, M.A.

(2006) Nature 7: 443

Released	2006-10-05
Method	X-RAY DIFFRACTION 2.44 Å
Organisms	Escherichia coli
Macromolecule	EXORIBONUCLEASE 2 (protein)
Unique Ligands	C5P, CA, MG

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2IX1 \| pdb_00002ix1	Download File View File

RNase II D209N mutant

Frazao, C., McVey, C.E., Amblar, M., Barbas, A., Vonrhein, C., Arraiano, C.M., Carrondo, M.A.

(2006) Nature 443: 110

Released	2006-10-05
Method	X-RAY DIFFRACTION 2.74 Å
Organisms	Escherichia coli Escherichia coli BL21(DE3)
Macromolecule	EXORIBONUCLEASE 2 (protein) 5'-D(APAPAPAPAPAPAPAPAPAP APAP*A)-3' (nucleic acid)
Unique Ligands	MG

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2JK4 \| pdb_00002jk4	Download File View File

Structure of the human voltage-dependent anion channel

Bayrhuber, M., Meins, T., Habeck, M., Becker, S., Giller, K., Villinger, S., Vonrhein, C., Griesinger, C., Zweckstetter, M., Zeth, K.

(2008) Proc Natl Acad Sci U S A 105: 15370

Released	2008-10-14
Method	X-RAY DIFFRACTION 4.1 Å
Organisms	Homo sapiens
Macromolecule	VOLTAGE-DEPENDENT ANION-SELECTIVE CHANNEL PROTEIN 1 (protein)

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2QE0 \| pdb_00002qe0	Download File View File

Thioacylenzyme Intermediate of GAPN from S. Mutans, New Data Integration and Refinement.

Corbier, C., Didierjean, C., Bricogne, G., Branlant, G., D'Ambrosio, K., Vonrhein, C.

(2006) Biochemistry 45: 2978-2986

Released	2007-12-25
Method	X-RAY DIFFRACTION 2.19 Å
Organisms	Streptococcus mutans
Macromolecule	NADP-dependent glyceraldehyde-3-phosphate dehydrogenase (protein)
Unique Ligands	G3H, NAP

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2V4J \| pdb_00002v4j	Download File View File

THE CRYSTAL STRUCTURE OF Desulfovibrio vulgaris DISSIMILATORY SULFITE REDUCTASE BOUND TO DsrC PROVIDES NOVEL INSIGHTS INTO THE MECHANISM OF SULFATE RESPIRATION

Oliveira, T.F., Vonrhein, C., Matias, P.M., Venceslau, S.S., Pereira, I.A.C., Archer, M.

(2008) J Biological Chem 283: 34141

Released	2008-12-02
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Nitratidesulfovibrio vulgaris str. Hildenborough
Macromolecule	SULFITE REDUCTASE, DISSIMILATORY-TYPE SUBUNIT ALPHA (protein) SULFITE REDUCTASE, DISSIMILATORY-TYPE SUBUNIT BETA (protein) SULFITE REDUCTASE, DISSIMILATORY-TYPE SUBUNIT GAMMA (protein)
Unique Ligands	SF4, SH0, SO3, SRM

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2VKZ \| pdb_00002vkz	Download File View File

Structure of the cerulenin-inhibited fungal fatty acid synthase type I multienzyme complex

Johansson, P., Wiltschi, B., Kumari, P., Kessler, B., Vonrhein, C., Vonck, J., Oesterhelt, D., Grininger, M.

(2008) Proc Natl Acad Sci U S A 105: 12803

Released	2008-08-12
Method	X-RAY DIFFRACTION 4 Å
Organisms	Saccharomyces cerevisiae
Macromolecule	FATTY ACID SYNTHASE SUBUNIT ALPHA (protein) FATTY ACID SYNTHASE SUBUNIT BETA (protein)
Unique Ligands	CER, FMN

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2W2G \| pdb_00002w2g	Download File View File

Human SARS coronavirus unique domain

Tan, J., Vonrhein, C., Smart, O.S., Bricogne, G., Bollati, M., Kusov, Y., Hansen, G., Mesters, J.R., Schmidt, C.L., Hilgenfeld, R.

(2009) PLoS Pathog 5: 428

Released	2009-05-26
Method	X-RAY DIFFRACTION 2.22 Å
Organisms	Severe acute respiratory syndrome-related coronavirus
Macromolecule	NON-STRUCTURAL PROTEIN 3 (protein)
Unique Ligands	SO4

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2WCT \| pdb_00002wct	Download File View File

human SARS coronavirus unique domain (triclinic form)

Tan, J., Vonrhein, C., Smart, O.S., Bricogne, G., Bollati, M., Hansen, G., Mesters, J.R., Hilgenfeld, R.

(2009) PLoS Pathog 5: 428

Released	2009-05-26
Method	X-RAY DIFFRACTION 2.79 Å
Organisms	Severe acute respiratory syndrome-related coronavirus
Macromolecule	NON-STRUCTURAL PROTEIN 3 (protein)

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2WIT \| pdb_00002wit	Download File View File

CRYSTAL STRUCTURE OF THE SODIUM-COUPLED GLYCINE BETAINE SYMPORTER BETP FROM CORYNEBACTERIUM GLUTAMICUM WITH BOUND SUBSTRATE

Ressl, S., Terwisscha Van Scheltinga, A.C., Vonrhein, C., Ott, V., Ziegler, C.

(2009) Nature 458: 47

Released	2009-05-26
Method	X-RAY DIFFRACTION 3.35 Å
Organisms	Corynebacterium glutamicum
Macromolecule	GLYCINE BETAINE TRANSPORTER BETP (protein)
Unique Ligands	BET

1 to 25 of 64 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1CJC | pdb_00001cjc

1G29 | pdb_00001g29

1J5E | pdb_00001j5e

1LF1 | pdb_00001lf1

1M83 | pdb_00001m83

1MAU | pdb_00001mau

1MAW | pdb_00001maw

1MB2 | pdb_00001mb2

1NKS | pdb_00001nks

1SYQ | pdb_00001syq

1TR2 | pdb_00001tr2

1W0E | pdb_00001w0e

1W0F | pdb_00001w0f

1W0G | pdb_00001w0g

2B0J | pdb_00002b0j

2F5I | pdb_00002f5i

2IX0 | pdb_00002ix0

2IX1 | pdb_00002ix1

2JK4 | pdb_00002jk4

2QE0 | pdb_00002qe0

2V4J | pdb_00002v4j

2VKZ | pdb_00002vkz

2W2G | pdb_00002w2g

2WCT | pdb_00002wct

2WIT | pdb_00002wit