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232,829 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Esquivies, L."

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Search Summary

This query matches 33 Structures.

Refinements

Structure Determination Methodology

experimental (33)

Scientific Name of Source Organism

	Nostoc punctiforme PCC 73102 (10)
	Severe acute respiratory syndrome coronavirus 2 (10)
	Homo sapiens (9)
	Mus musculus (8)
	Escherichia coli K-12 (3)
	Escherichia coli BL21(DE3) (2)
	Rattus norvegicus (1)

Taxonomy

	Eukaryota (18)
	Bacteria (15)
	Riboviria (10)

Experimental Method

	ELECTRON MICROSCOPY (18)
	SOLUTION NMR (10)
	X-RAY DIFFRACTION (5)

Polymer Entity Type

Protein (33)

Refinement Resolution (Å)

	1.5 - 2.0 (1)
	2.0 - 2.5 (9)
	2.5 - 3.0 (3)
	3.5 - 4.0 (3)
	4.0 - 4.5 (6)
	> 4.5 (1)

Release Date

	2010 - 2014 (14)
	2020 - 2024 (19)

Enzyme Classification Name

	Hydrolases (8)
	Translocases (6)
	Transferases (3)

Membrane Protein Annotation

	mpstruc (12)
	PDBTM (14)
	MemProtMD (12)
	OPM (8)

Symmetry Type

	Asymmetric (19)
	Cyclic (14)

SCOP Classification

	Coiled coil proteins (1)
	Small proteins (2)
	Artifacts (1)

AllSelected

1 to 25 of 33 Structures

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2KSD	Download File View File

Backbone structure of the membrane domain of E. coli histidine kinase receptor ArcB, Center for Structures of Membrane Proteins (CSMP) target 4310C

Maslennikov, I., Klammt, C., Hwang, E., Kefala, G., Kwiatkowski, W., Jeon, Y., Choe, S., Center for Structures of Membrane Proteins (CSMP)

(2010) Proc Natl Acad Sci U S A 107: 10902-10907

Released	2010-03-02
Method	SOLUTION NMR
Organisms	Escherichia coli K-12
Macromolecule	Aerobic respiration control sensor protein arcB (protein)

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2KSE	Download File View File

Backbone structure of the membrane domain of E. coli histidine kinase receptor QseC, Center for Structures of Membrane Proteins (CSMP) target 4311C

Maslennikov, I., Klammt, C., Kefala, G., Esquivies, L., Kwiatkowski, W., Choe, S., Center for Structures of Membrane Proteins (CSMP)

(2010) Proc Natl Acad Sci U S A 107: 10902-10907

Released	2010-03-02
Method	SOLUTION NMR
Organisms	Escherichia coli K-12
Macromolecule	Sensor protein qseC (protein)

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2KSF	Download File View File

Backbone structure of the membrane domain of E. coli histidine kinase receptor KdpD, Center for Structures of Membrane Proteins (CSMP) target 4312C

Maslennikov, I., Klammt, C., Kefala, G., Okamura, M., Esquivies, L., Kwiatkowski, W., Choe, S., Center for Structures of Membrane Proteins (CSMP)

(2010) Proc Natl Acad Sci U S A 107: 10902-10907

Released	2010-03-02
Method	SOLUTION NMR
Organisms	Escherichia coli K-12
Macromolecule	Sensor protein kdpD (protein)

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2LOM	Download File View File

Backbone structure of human membrane protein HIGD1A

Blain, K., Klammt, C., Maslennikov, I., Kwiatkowski, W., Choe, S.

(2012) Nat Methods 9: 834-839

Released	2012-05-23
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	HIG1 domain family member 1A (protein)

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2LON	Download File View File

Backbone structure of human membrane protein HIGD1B

Klammt, C., Maslennikov, I., Kwiatkowski, W., Choe, S.

(2012) Nat Methods 9: 834-839

Released	2012-05-23
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	HIG1 domain family member 1B (protein)

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2LOO	Download File View File

Backbone structure of human membrane protein TMEM14A from NOE data

Eichmann, C., Klammt, C., Maslennikov, I., Riek, R., Choe, S.

(2012) Nat Methods 9: 834-839

Released	2012-05-23
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Transmembrane protein 14A (protein)

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2LOP	Download File View File

Backbone structure of human membrane protein TMEM14A

Eichmann, C., Klammt, C., Maslennikov, I., Kwiatkowski, W., Riek, R., Choe, S.

(2012) Nat Methods 9: 834-839

Released	2012-05-23
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Transmembrane protein 14A (protein)

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2LOQ	Download File View File

Backbone structure of human membrane protein FAM14B (Interferon alpha-inducible protein 27-like protein 1)

Klammt, C., Chui, E.J., Maslennikov, I., Kwiatkowski, W., Choe, S.

(2012) Nat Methods 9: 834-839

Released	2012-05-23
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Interferon alpha-inducible protein 27-like protein 1 (protein)

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2LOR	Download File View File

Backbone structure of human membrane protein TMEM141

Bayrhuber, M., Klammt, C., Maslennikov, I., Riek, R., Choe, S.

(2012) Nat Methods 9: 834-839

Released	2012-05-23
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Transmembrane protein 141 (protein)

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2LOS	Download File View File

Backbone structure of human membrane protein TMEM14C

Klammt, C., Vajpai, N., Maslennikov, I., Riek, R., Choe, S.

(2012) Nat Methods 9: 834-839

Released	2012-05-23
Method	SOLUTION NMR
Organisms	Homo sapiens
Macromolecule	Transmembrane protein 14C (protein)

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3K19	Download File View File

OmpF porin

Kefala, G., Ahn, C., Krupa, M., Maslennikov, I., Kwiatkowski, W., Choe, S., Center for Structures of Membrane Proteins (CSMP)

(2010) Protein Sci 19: 1117-1125

Released	2010-04-14
Method	X-RAY DIFFRACTION 3.79 Å
Organisms	Escherichia coli BL21(DE3)
Macromolecule	Outer membrane protein F (protein)

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3K1B	Download File View File

Structure of OmpF porin

Kefala, G., Ahn, C., Krupa, M., Maslennikov, I., Kwiatkowski, W., Choe, S., Center for Structures of Membrane Proteins (CSMP)

(2010) Protein Sci 19: 1117-1125

Released	2010-04-14
Method	X-RAY DIFFRACTION 4.39 Å
Organisms	Escherichia coli BL21(DE3)
Macromolecule	Outer membrane protein F (protein)

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4MID	Download File View File

Crystal Structure of Activin A/BMP2 chimera

Esquivies, L.

(2014) J Bone Miner Res 29: 1950-1959

Released	2014-05-07
Method	X-RAY DIFFRACTION 2.139 Å
Organisms	Homo sapiens
Macromolecule	AB204 Activin A/BMP2 chimera (protein)

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4N1D	Download File View File

Nodal/BMP2 chimera NB250

Esquivies, L.

(2014) J Biological Chem 289: 1788-1797

Released	2013-12-04
Method	X-RAY DIFFRACTION 1.912 Å
Organisms	Homo sapiens
Macromolecule	Nodal/BMP2 chimera protein (protein)

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6WVW	Download File View File

Crystal structure of the R59P-SNAP25 containing SNARE complex

Zhou, Q., White, K.I., Brunger, A.T.

(2021) Neuron 109: 59-72.e5

Released	2021-03-17
Method	X-RAY DIFFRACTION 2.11 Å
Organisms	Rattus norvegicus
Macromolecule	Synaptosomal-associated protein 25 (protein) Syntaxin-1A (protein) Vesicle-associated membrane protein 2 (protein)
Unique Ligands	CA, MPD

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7RZQ	Download File View File

Cryo-EM structure of the SARS-CoV-2 HR1HR2 fusion core complex

Yang, K., Brunger, A.T.

(2022) Proc Natl Acad Sci U S A 119: e2119467119-e2119467119

Released	2022-04-06
Method	ELECTRON MICROSCOPY 2.09 Å
Organisms	Nostoc punctiforme PCC 73102 Severe acute respiratory syndrome coronavirus 2
Macromolecule	SARS-CoV-2 HR1 linked to a scaffold,Spike protein S2' (protein) Spike protein S2' (protein)

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7RZR	Download File View File

Cryo-EM structure of the SARS-CoV-2 HR1HR2 fusion core complex with D936Y mutation

Yang, K., Brunger, A.T.

(2022) Proc Natl Acad Sci U S A 119: e2119467119-e2119467119

Released	2022-04-06
Method	ELECTRON MICROSCOPY 2.27 Å
Organisms	Nostoc punctiforme PCC 73102 Severe acute respiratory syndrome coronavirus 2
Macromolecule	SARS-CoV-2 HR1 D936Y linked to a scaffold,Spike protein S2' (protein) Spike protein S2' (protein)

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7RZS	Download File View File

Cryo-EM structure of the SARS-CoV-2 HR1HR2 fusion core complex with L938F mutation

Yang, K., Brunger, A.T.

(2022) Proc Natl Acad Sci U S A 119: e2119467119-e2119467119

Released	2022-04-06
Method	ELECTRON MICROSCOPY 2.52 Å
Organisms	Nostoc punctiforme PCC 73102 Severe acute respiratory syndrome coronavirus 2
Macromolecule	SARS-CoV-2 HR1 L938F linked to a scaffold,Spike protein S2' (protein) Spike protein S2' (protein)

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7RZT	Download File View File

Cryo-EM structure of the SARS-CoV-2 HR1HR2 fusion core complex with S940F mutation

Yang, K., Brunger, A.T.

(2022) Proc Natl Acad Sci U S A 119: e2119467119-e2119467119

Released	2022-04-06
Method	ELECTRON MICROSCOPY 2.35 Å
Organisms	Nostoc punctiforme PCC 73102 Severe acute respiratory syndrome coronavirus 2
Macromolecule	SARS-CoV-2 HR1 S940F linked to a scaffold,Spike protein S2' (protein) Spike protein S2' (protein)

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7RZU	Download File View File

Cryo-EM structure of the SARS-CoV-2 HR1HR2 fusion core complex with A942S mutation

Yang, K., Brunger, A.T.

(2022) Proc Natl Acad Sci U S A 119: e2119467119-e2119467119

Released	2022-04-06
Method	ELECTRON MICROSCOPY 2.3 Å
Organisms	Nostoc punctiforme PCC 73102 Severe acute respiratory syndrome coronavirus 2
Macromolecule	SARS-CoV-2 HR1 A942S linked to a scaffold,Spike protein S2' (protein) Spike protein S2' (protein)

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7RZV	Download File View File

Cryo-EM structure of the SARS-CoV-2 HR1HR2 fusion core complex with V1176F mutation

Yang, K., Brunger, A.T.

(2022) Proc Natl Acad Sci U S A 119: e2119467119-e2119467119

Released	2022-04-06
Method	ELECTRON MICROSCOPY 2.11 Å
Organisms	Nostoc punctiforme PCC 73102 Severe acute respiratory syndrome coronavirus 2
Macromolecule	SARS-CoV-2 HR1 linked to a scaffold,Spike protein S2' (protein) Spike protein S2' (protein)

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7TIK	Download File View File

Structure of the SARS-CoV-2 Omicron spike post-fusion bundle

Yang, K., Brunger, A.T.

(2023) Proc Natl Acad Sci U S A 120: e2300360120-e2300360120

Released	2022-04-06
Method	ELECTRON MICROSCOPY 2.4 Å
Organisms	Nostoc punctiforme PCC 73102 Severe acute respiratory syndrome coronavirus 2
Macromolecule	Ferritin, Dps family protein and Spike protein S2' chimera (protein) Spike protein S2' (protein)

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8CZI	Download File View File

Cryo-EM structure of the SARS-CoV-2 HR1HR2 fusion core complex with extended HR2

Yang, K., Brunger, A.T.

(2022) Proc Natl Acad Sci U S A 119: e2210990119-e2210990119

Released	2022-09-07
Method	ELECTRON MICROSCOPY 2.22 Å
Organisms	Nostoc punctiforme PCC 73102 Severe acute respiratory syndrome coronavirus 2
Macromolecule	Scaffolded Spike protein S2' HR1 (protein) Spike protein S2' HR2 (protein)

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8FA1	Download File View File

Cryo-EM structure of the SARS-CoV-2 HR1HR2 fusion core complex with N969K mutation

Yang, K., Brunger, A.T.

(2023) Proc Natl Acad Sci U S A 120: e2300360120-e2300360120

Released	2023-03-29
Method	ELECTRON MICROSCOPY 2.51 Å
Organisms	Nostoc punctiforme PCC 73102 Severe acute respiratory syndrome coronavirus 2
Macromolecule	Ferritin, Dps family protein and Spike protein S2' chimera (protein) Spike protein S2' HR2 (protein)

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8FA2	Download File View File

Cryo-EM structure of the SARS-CoV-2 Omicron HR1-42G complex

Yang, K., Brunger, A.T.

(2023) Proc Natl Acad Sci U S A 120: e2300360120-e2300360120

Released	2023-03-29
Method	ELECTRON MICROSCOPY 2.82 Å
Organisms	Nostoc punctiforme PCC 73102 Severe acute respiratory syndrome coronavirus 2
Macromolecule	Scaffolded Spike protein S2' HR1 (protein) Spike protein S2' 42G (protein)