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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Holton, T."

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Search Summary

This query matches 146 Structures.

Refinements

Structure Determination Methodology

experimental (146)

Scientific Name of Source Organism

	Homo sapiens (94)
	Severe acute respiratory syndrome coronavirus 2 (14)
	synthetic construct (10)
	Human alphaherpesvirus 1 strain KOS (8)
	Gallus gallus (6)
	Phanerodontia chrysosporium (6)
	Vicugna pacos (5)
	Deinococcus aerius (4)
	Thermothelomyces myriococcoides (4)
	Lama glama (3)

More...

Taxonomy

	Eukaryota (125)
	Riboviria (17)
	Bacteria (11)
	other sequences (10)
	Duplodnaviria (9)
	Eukaryota (eukaryotes) (1)

Experimental Method

	X-RAY DIFFRACTION (101)
	ELECTRON MICROSCOPY (45)

Polymer Entity Type

	Protein (146)
	RNA (13)
	DNA (8)

Refinement Resolution (Å)

	1.0 - 1.5 (8)
	1.5 - 2.0 (37)
	2.0 - 2.5 (34)
	2.5 - 3.0 (48)
	3.0 - 3.5 (13)
	3.5 - 4.0 (3)
	4.0 - 4.5 (2)
	> 4.5 (1)

Release Date

	2000 - 2004 (12)
	2005 - 2009 (68)
	2010 - 2014 (3)
	2015 - 2019 (15)
	2020 - 2024 (48)

Enzyme Classification Name

	Hydrolases (43)
	Transferases (39)
	Oxidoreductases (17)
	Lyases (8)
	Ligases (6)
	Isomerases (2)

Membrane Protein Annotation

OPM (3)

Symmetry Type

	Asymmetric (87)
	Cyclic (46)
	Dihedral (14)
	Helical (1)

SCOP Classification

	Alpha and beta proteins (a/b) (26)
	Alpha and beta proteins (a+b) (22)
	Artifacts (17)
	All beta proteins (12)
	All alpha proteins (11)
	Multi-domain proteins (alpha and beta) (3)
	Small proteins (1)
	Membrane and cell surface proteins and peptides (1)

AllSelected

1 to 25 of 146 Structures

Page 1 of 6

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1D7B \| pdb_00001d7b	Download File View File

CYTOCHROME DOMAIN OF CELLOBIOSE DEHYDROGENASE, PH 7.5

Hallberg, B.M., Bergfors, T., Backbro, K., Divne, C.

(2000) Structure 8: 79-88

Released	2000-10-18
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Phanerodontia chrysosporium
Macromolecule	CELLOBIOSE DEHYDROGENASE (protein)
Unique Ligands	1PG, CD, HEM
Unique branched monosaccharides	BMA, NAG

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1D7C \| pdb_00001d7c	Download File View File

CYTOCHROME DOMAIN OF CELLOBIOSE DEHYDROGENASE, PH 4.6

Hallberg, B.M., Bergfors, T., Backbro, K., Divne, C.

(2000) Structure 8: 79-88

Released	2000-10-18
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Phanerodontia chrysosporium
Macromolecule	CELLOBIOSE DEHYDROGENASE (protein)
Unique Ligands	1PG, CD, HEM
Unique branched monosaccharides	BMA, NAG

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1D7D \| pdb_00001d7d	Download File View File

CYTOCHROME DOMAIN OF CELLOBIOSE DEHYDROGENASE, HP3 FRAGMENT, PH 7.5

Hallberg, B.M., Bergfors, T., Backbro, K., Divne, C.

(2000) Structure 8: 79-88

Released	2000-10-18
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Phanerodontia chrysosporium
Macromolecule	CELLOBIOSE DEHYDROGENASE (protein)
Unique Ligands	1PG, CD, HEM
Unique branched monosaccharides	BMA, MAN, NAG

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1KDG \| pdb_00001kdg	Download File View File

Crystal structure of the flavin domain of cellobiose dehydrogenase

Hallberg, B.M., Henriksson, G., Pettersson, G., Divne, C.

(2002) J Mol Biology 315: 421-434

Released	2002-11-13
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Phanerodontia chrysosporium
Macromolecule	cellobiose dehydrogenase (protein)
Unique Ligands	6FA, EMT, HG, MAN, NAG, UNX

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1N8U \| pdb_00001n8u	Download File View File

Chemosensory Protein in Complex with bromo-dodecanol

Campanacci, V., Lartigue, A., Hallberg, B.M., Jones, T.A., Giudici-Orticoni, M.T., Tegoni, M., Cambillau, C.

(2003) Proc Natl Acad Sci U S A 100: 5069-5074

Released	2003-04-01
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Mamestra brassicae
Macromolecule	chemosensory protein (protein)
Unique Ligands	BDD

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1N8V \| pdb_00001n8v	Download File View File

Chemosensory Protein in complex with bromo-dodecanol

Campanacci, V., Lartigue, A., Hallberg, B.M., Jones, T.A., Giudici-Orticoni, M.T., Tegoni, M., Cambillau, C.

(2003) Proc Natl Acad Sci U S A 100: 5069-5074

Released	2003-04-01
Method	X-RAY DIFFRACTION 1.39 Å
Organisms	Mamestra brassicae
Macromolecule	chemosensory protein (protein)
Unique Ligands	BDD

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1NAA \| pdb_00001naa	Download File View File

Cellobiose Dehydrogenase Flavoprotein Fragment in Complex with Cellobionolactam

Hallberg, B.M., Henriksson, G., Pettersson, G., Vasella, A., Divne, C.

(2003) J Biological Chem 278: 7160-7166

Released	2003-01-14
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Phanerodontia chrysosporium
Macromolecule	Cellobiose dehydrogenase (protein)
Unique Ligands	6FA, ABL, NAG

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1NU3 \| pdb_00001nu3	Download File View File

Limonene-1,2-epoxide hydrolase in complex with valpromide

Arand, M., Hallberg, B.M., Zou, J., Bergfors, T., Oesch, F., van der Werf, M.J., de Bont, J.A.M., Jones, T.A., Mowbray, S.L.

(2003) EMBO J 22: 2583-2592

Released	2003-06-10
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Rhodococcus erythropolis
Macromolecule	limonene-1,2-epoxide hydrolase (protein)
Unique Ligands	MES, VPR

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1NWW \| pdb_00001nww	Download File View File

Limonene-1,2-epoxide hydrolase

Arand, M., Hallberg, B.M., Zou, J., Bergfors, T., Oesch, F., van der Werf, M.J., de Bont, J.A.M., Jones, T.A., Mowbray, S.L.

(2003) EMBO J 22: 2583-2592

Released	2003-06-10
Method	X-RAY DIFFRACTION 1.2 Å
Organisms	Rhodococcus erythropolis
Macromolecule	Limonene-1,2-epoxide hydrolase (protein)
Unique Ligands	HPN, MES

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1PL3 \| pdb_00001pl3	Download File View File

Cytochrome Domain Of Cellobiose Dehydrogenase, M65H mutant

Rotsaert, F.A.J., Hallberg, B.M., de Vries, S., Moenne-Loccoz, P., Divne, C., Gold, M.H.

(2003) J Biological Chem 278: 33224-33231

Released	2003-07-01
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Phanerodontia chrysosporium
Macromolecule	Cellobiose dehydrogenase (protein)
Unique Ligands	1PG, CD, HEM
Unique branched monosaccharides	NAG

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1QO7 \| pdb_00001qo7	Download File View File

Structure of Aspergillus niger epoxide hydrolase

Zou, J.-Y., Hallberg, B.M., Bergfors, T., Oesch, F., Arand, M., Mowbray, S.L., Jones, T.A.

(2000) Structure 8: 111

Released	2000-02-10
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Aspergillus niger
Macromolecule	EPOXIDE HYDROLASE (protein)

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1SZW \| pdb_00001szw	Download File View File

Crystal structure of E. coli tRNA pseudouridine synthase TruD

Ericsson, U.B., Nordlund, P., Hallberg, B.M., Structural Proteomics in Europe (SPINE)

(2004) FEBS Lett 565: 59-64

Released	2004-04-20
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	tRNA pseudouridine synthase D (protein)

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1TT0 \| pdb_00001tt0	Download File View File

Crystal Structure of Pyranose 2-Oxidase

Hallberg, B.M., Leitner, C., Haltrich, D., Divne, C.

(2004) J Mol Biology 341: 781-796

Released	2005-06-21
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Trametes ochracea
Macromolecule	pyranose oxidase (protein)
Unique Ligands	12P, ACT, FAD

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2A98 \| pdb_00002a98	Download File View File

Crystal structure of the catalytic domain of human inositol 1,4,5-trisphosphate 3-kinase C

Hallberg, B.M., Ogg, D., Ehn, M., Graslund, S., Hammarstrom, M., Kotenyova, T., Nilsson-Ehle, P., Nordlund, P., Persson, C., Sagemark, J., Schuler, H., Stenmark, P., Thorsell, A.-G., Arrowsmith, C., Edwards, A., Sundstrom, M., Weigelt, J., Structural Genomics Consortium (SGC)

To be published

Released	2005-07-19
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Homo sapiens
Macromolecule	Inositol 1,4,5-trisphosphate 3-kinase C (protein)
Unique Ligands	I3P

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2BON \| pdb_00002bon	Download File View File

Structure of an Escherichia coli lipid kinase (YegS)

Bakali, H.M., Johnson, K.A., Hallberg, B.M., Herman, M.D., Nordlund, P.

(2007) J Biological Chem 282: 19644

Released	2006-10-18
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Escherichia coli BL21(DE3)
Macromolecule	LIPID KINASE (protein)
Unique Ligands	MG

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2BZN \| pdb_00002bzn	Download File View File

Crystal structure of human guanosine monophosphate reductase 2 GMPR2 in complex with IMP

Stenmark, P., Kursula, P., Arrowsmith, C., Berglund, H., Edwards, A., Ehn, M., Graslund, S., Hammarstrom, M., Hallberg, B.M., Kotenyova, T., Nilsson-Ehle, P., Nordlund, P., Ogg, D., Persson, C., Sagemark, J., Schuler, H., Sundstrom, M., Thorsell, A., Weigelt, J.

(2011) Nat Chem Biol 7: 950

Released	2005-09-02
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Homo sapiens
Macromolecule	GMP REDUCTASE 2 (protein)
Unique Ligands	IMP

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2C4K \| pdb_00002c4k	Download File View File

Crystal structure of human phosphoribosylpyrophosphate synthetase- associated protein 39 (PAP39)

Kursula, P., Stenmark, P., Arrowsmith, C., Berglund, H., Edwards, A., Ehn, M., Flodin, S., Graslund, S., Hammarstrom, M., Hallberg, B.M., Holmberg Schiavone, L., Kotenyova, T., Nilsson-Ehle, P., Ogg, D., Persson, C., Sagemark, J., Schuler, H., Sundstrom, M., Thorsell, A.G., Van Den Berg, S., Weigelt, J., Nordlund, P.

To be published

Released	2005-10-24
Method	X-RAY DIFFRACTION 2.65 Å
Organisms	Homo sapiens
Macromolecule	PHOSPHORIBOSYL PYROPHOSPHATE SYNTHETASE-ASSOCIATED PROTEIN 1 (protein)
Unique Ligands	SO4, TAM

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2C6Q \| pdb_00002c6q	Download File View File

Crystal structure of human guanosine monophosphate reductase 2 GMPR2 in complex with IMP and NADPH

Kursula, P., Stenmark, P., Arrowsmith, C., Berglund, H., Edwards, A., Ehn, M., Graslund, S., Hammarstrom, M., Hallberg, B.M., Kotenyova, T., Nilsson-Ehle, P., Ogg, D., Persson, C., Sagemark, J., Schuler, H., Sundstrom, M., Thorsell, A., Weigelt, J., Nordlund, P.

(2011) Nat Chem Biol 7: 950

Released	2005-11-30
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Homo sapiens
Macromolecule	GMP REDUCTASE 2 (protein)
Unique Ligands	IMP, NDP

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2CAR \| pdb_00002car	Download File View File

Crystal Structure Of Human Inosine Triphosphatase

Stenmark, P., Kursula, P., Arrowsmith, C., Berglund, H., Edwards, A., Ehn, M., Flodin, S., Flores, A., Graslund, S., Hammarstrom, M., Hallberg, B.M., Hogbom, M., Holmberg Schiavone, L., Kotenyova, T., Nilsson-Ehle, P., Nyman, T., Ogg, D., Persson, C., Sagemark, J., Schuler, H., Sundstrom, M., Thorsell, A.G., van den Berg, S., Weigelt, J., Nordlund, P.

(2007) J Biological Chem 282: 3182

Released	2006-01-04
Method	X-RAY DIFFRACTION 1.09 Å
Organisms	Homo sapiens
Macromolecule	INOSINE TRIPHOSPHATE PYROPHOSPHATASE (protein)

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2CL3 \| pdb_00002cl3	Download File View File

Crystal structure of human Cleavage and Polyadenylation Specificity Factor 5 (CPSF5)

Stenmark, P., Hogbom, M., Arrowsmith, C., Berglund, H., Collins, R., Edwards, A., Ehn, M., Flodin, S., Flores, A., Graslund, S., Hammarstrom, M., Hallberg, B.M., Holmberg Schiavone, L., Kotenyova, T., Magnusdottir, A., Nilsson-Ehle, P., Nyman, T., Ogg, D., Persson, C., Sagemark, J., Sundstrom, M., Thorsell, A.G., Van Den Berg, S., Wallden, K., Weigelt, J., Nordlund, P.

(2008) Proteins 73: 1047

Released	2006-05-04
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR 5 (protein)

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2CN1 \| pdb_00002cn1	Download File View File

Crystal structure of Human Cytosolic 5'-Nucleotidase III (NT5C3)

Wallden, K., Stenmark, P., Arrowsmith, C., Berglund, H., Collins, R., Edwards, A., Ehn, M., Flodin, S., Flores, A., Graslund, S., Hammarstrom, M., Hallberg, B.M., Holmberg Schiavone, L., Hogbom, M., Kotenyova, T., Magnusdottir, A., Nilsson-Ehle, P., Nyman, T., Ogg, D., Persson, C., Sagemark, J., Sundstrom, M., Thorsell, A.G., Uppenberg, J., Van Den Berg, S., Weigelt, J., Welin, M., Nordlund, P.

(2007) J Biological Chem 282: 17828

Released	2006-06-12
Method	X-RAY DIFFRACTION 2.67 Å
Organisms	Homo sapiens
Macromolecule	CYTOSOLIC 5'-NUCLEOTIDASE III (protein)

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2F73 \| pdb_00002f73	Download File View File

Crystal structure of human fatty acid binding protein 1 (FABP1)

Kursula, P., Thorsell, A.G., Arrowsmith, C., Berglund, H., Edwards, A., Ehn, M., Flodin, S., Graslund, S., Hammarstrom, M., Holmberg Schiavone, L., Kotenyova, T., Nilsson-Ehle, P., Nordlund, P., Nyman, T., Ogg, D., Persson, C., Sagemark, J., Stenmark, P., Sundstrom, M., van den Berg, S., Weigelt, J., Hallberg, B.M., Structural Genomics Consortium (SGC)

To be published

Released	2005-12-13
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Homo sapiens
Macromolecule	Fatty acid-binding protein, liver (protein)

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2FIM \| pdb_00002fim	Download File View File

Structure of the C-terminal domain of Human Tubby-like protein 1

Hallberg, B.M., Ogg, D., Arrowsmith, C., Berglund, H., Edwards, A., Ehn, M., Flodin, S., Graslund, S., Hammarstrom, M., Hogbom, M., Holmberg-Schiavone, L., Kotenyova, T., Kursula, P., Nilsson-Ehle, P., Nordlund, P., Nyman, T., Sagemark, J., Stenmark, P., Sundstrom, M., Thorsell, A.G., Van Den Berg, S., Weigelt, J., Persson, C.

To be published

Released	2006-02-07
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Tubby related protein 1 (protein)
Unique Ligands	3DP, SO4

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2FRX \| pdb_00002frx	Download File View File

Crystal structure of YebU, a m5C RNA methyltransferase from E.coli

Erlandsen, H., Nordlund, P., Hallberg, B.M., Johnson, K.A., Ericsson, U.B.

(2006) J Mol Biology 360: 774-787

Released	2006-08-29
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Escherichia coli
Macromolecule	Hypothetical protein yebU (protein)

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2FVV \| pdb_00002fvv	Download File View File

Human Diphosphoinositol polyphosphate phosphohydrolase 1

Hallberg, B.M., Kursula, P., Ogg, D., Arrowsmith, C., Berglund, H., Edwards, A., Ehn, M., Flodin, S., Graslund, S., Hammarstrom, M., Hogbom, M., Holmberg-Schiavone, L., Kotenyova, T., Nilsson-Ehle, P., Nordlund, P., Nyman, T., Sagemark, J., Stenmark, P., Sundstrom, M., Thorsell, A.G., van den Berg, S., Weigelt, J., Persson, C., Structural Genomics Consortium (SGC)

(2009) Proteins 77: 242-246

Released	2006-03-11
Method	X-RAY DIFFRACTION 1.25 Å
Organisms	Homo sapiens
Macromolecule	Diphosphoinositol polyphosphate phosphohydrolase 1 (protein)
Unique Ligands	CL, IHP, SO4

1 to 25 of 146 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1D7B | pdb_00001d7b

1D7C | pdb_00001d7c

1D7D | pdb_00001d7d

1KDG | pdb_00001kdg

1N8U | pdb_00001n8u

1N8V | pdb_00001n8v

1NAA | pdb_00001naa

1NU3 | pdb_00001nu3

1NWW | pdb_00001nww

1PL3 | pdb_00001pl3

1QO7 | pdb_00001qo7

1SZW | pdb_00001szw

1TT0 | pdb_00001tt0

2A98 | pdb_00002a98

2BON | pdb_00002bon

2BZN | pdb_00002bzn

2C4K | pdb_00002c4k

2C6Q | pdb_00002c6q

2CAR | pdb_00002car

2CL3 | pdb_00002cl3

2CN1 | pdb_00002cn1

2F73 | pdb_00002f73

2FIM | pdb_00002fim

2FRX | pdb_00002frx

2FVV | pdb_00002fvv