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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Peng, C."

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Search Summary

This query matches 156 Structures.

Refinements

Structure Determination Methodology

experimental (156)

Scientific Name of Source Organism

	Homo sapiens (83)
	Severe acute respiratory syndrome coronavirus 2 (18)
	Omsk hemorrhagic fever virus (10)
	Mus musculus (7)
	Saccharomyces cerevisiae (7)
	synthetic construct (7)
	Chlorobium limicola (6)
	Drosophila melanogaster (6)
	Saccharomyces cerevisiae S288C (5)
	Bos taurus (3)

More...

Taxonomy

	Eukaryota (119)
	Riboviria (34)
	Bacteria (13)
	other sequences (7)

Experimental Method

	X-RAY DIFFRACTION (111)
	ELECTRON MICROSCOPY (45)

Polymer Entity Type

	Protein (155)
	RNA (2)
	DNA (1)

Refinement Resolution (Å)

	1.0 - 1.5 (6)
	1.5 - 2.0 (31)
	2.0 - 2.5 (46)
	2.5 - 3.0 (25)
	3.0 - 3.5 (21)
	3.5 - 4.0 (11)
	4.0 - 4.5 (6)
	> 4.5 (10)

Release Date

	2000 - 2004 (2)
	2005 - 2009 (1)
	2010 - 2014 (1)
	2015 - 2019 (16)
	2020 - 2024 (136)

Enzyme Classification Name

	Hydrolases (53)
	Transferases (27)
	Oxidoreductases (7)
	Lyases (3)

Membrane Protein Annotation

	MemProtMD (3)
	OPM (3)
	PDBTM (3)
	mpstruc (3)

Symmetry Type

	Asymmetric (104)
	Cyclic (44)
	Dihedral (7)

SCOP Classification

	Alpha and beta proteins (a+b) (22)
	All alpha proteins (5)
	Multi-domain proteins (alpha and beta) (1)
	All beta proteins (2)
	Alpha and beta proteins (a/b) (2)

AllSelected

1 to 25 of 156 Structures

Page 1 of 7

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1XQZ \| pdb_00001xqz	Download File View File

Crystal Structure of hPim-1 kinase at 2.1 A resolution

Qian, K.C., Wang, L., Hickey, E.R., Studts, J., Barringer, K., Peng, C., Kronkaitis, A., Li, J., White, A., Mische, S., Farmer, B.

(2005) J Biological Chem 280: 6130-6137

Released	2004-11-09
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	Proto-oncogene serine/threonine-protein kinase Pim-1 (protein)

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1XR1 \| pdb_00001xr1	Download File View File

Crystal structure of hPim-1 kinase in complex with AMP-PNP at 2.1 A Resolution

Qian, K.C., Wang, L., Hickey, E.R., Studts, J., Barringer, K., Peng, C., Kronkaitis, A., Li, J., White, A., Mische, S., Farmer, B.

(2005) J Biological Chem 280: 6130-6137

Released	2004-11-09
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Homo sapiens
Macromolecule	Proto-oncogene serine/threonine-protein kinase Pim-1 (protein)
Unique Ligands	ANP, MG

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3F2A \| pdb_00003f2a	Download File View File

Crystal structure of human Pim-1 in complex with DAPPA

Qian, K.

(2009) J Med Chem 52: 1814-1827

Released	2009-03-10
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	Proto-oncogene serine/threonine-protein kinase Pim-1 (protein)
Unique Ligands	985, MG

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3KT9 \| pdb_00003kt9	Download File View File

Aprataxin FHA Domain

Cherry, A.L., Smerdon, S.J.

(2010) Nucleic Acids Res 38: 1489-1503

Released	2010-01-26
Method	X-RAY DIFFRACTION 1.65 Å
Organisms	Homo sapiens
Macromolecule	Aprataxin (protein)

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5YEI \| pdb_00005yei	Download File View File

Mechanistic insight into the regulation of Pseudomonas aeruginosa aspartate kinase

Li, C., Yang, M., Liu, L., Peng, C., Li, T., He, L., Song, Y., Zhu, Y., Bao, R.

(2018) Biochem J 475: 1107-1119

Released	2018-08-29
Method	X-RAY DIFFRACTION 2.301 Å
Organisms	Pseudomonas aeruginosa PAO1
Macromolecule	Aspartokinase (protein)
Unique Ligands	GOL, LYS, THR

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5YEV \| pdb_00005yev	Download File View File

Murine DR3 death domain

Yin, X., Jin, T.

(2019) FEBS J 286: 2593-2610

Released	2018-09-19
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Mus musculus
Macromolecule	TNFRSF25 death domain (protein)
Unique Ligands	SO4

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5YGB \| pdb_00005ygb	Download File View File

Crystal structure of drosophila melanogaster Papi extended Tudor domain mutant - D287A

Zhang, Y.H., Huang, Y.

(2018) Proc Natl Acad Sci U S A 115: 3374-3379

Released	2018-03-14
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Drosophila melanogaster
Macromolecule	GH18329p (protein)

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5YGC \| pdb_00005ygc	Download File View File

Crystal structure of Drosophila melanogaster Papi extended Tudor domain

Zhang, Y.H., Huang, Y.

(2018) Proc Natl Acad Sci U S A 115: 3374-3379

Released	2018-03-14
Method	X-RAY DIFFRACTION 2 Å
Organisms	Drosophila melanogaster
Macromolecule	GH18329p (protein)

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5YGD \| pdb_00005ygd	Download File View File

Crystal structure of Drosophila melanogaster Papi extended Tudor domain (D287A) in complex with Piwi N-terminal R10me2s peptide

Zhang, Y.H., Huang, Y.

(2018) Proc Natl Acad Sci U S A 115: 3374-3379

Released	2018-03-14
Method	X-RAY DIFFRACTION 1.551 Å
Organisms	Drosophila melanogaster
Macromolecule	ASP-GLN-GLY-ARG-GLY-ARG-2MR-ARG-PRO-LEU-ASN (protein) GH18329p (protein)

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5YGF \| pdb_00005ygf	Download File View File

Crystal structure of Drosophila melanogaster Papi extended Tudor domain (D287A) in complex with Piwi N-terminal R10-unme peptide

Zhang, Y.H., Huang, Y.

(2018) Proc Natl Acad Sci U S A 115: 3374-3379

Released	2018-03-14
Method	X-RAY DIFFRACTION 1.698 Å
Organisms	Drosophila melanogaster
Macromolecule	ASP-GLN-GLY-ARG-GLY-ARG-ARG-ARG-PRO (protein) GH18329p (protein)

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5YGP \| pdb_00005ygp	Download File View File

Human TNFRSF25 death domain mutant-D412E

Yin, X., Jin, T.C.

(2019) FEBS J 286: 2593-2610

Released	2018-10-03
Method	X-RAY DIFFRACTION 2.09 Å
Organisms	Homo sapiens
Macromolecule	TNFRSF25 death domain (protein)
Unique Ligands	SO4
Unique branched monosaccharides	GLC

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5YGS \| pdb_00005ygs	Download File View File

Human TNFRSF25 death domain

Yin, X., Jin, T.

(2019) FEBS J 286: 2593-2610

Released	2018-10-03
Method	X-RAY DIFFRACTION 2.691 Å
Organisms	Homo sapiens
Macromolecule	Human TNRSF25 death domain (protein)
Unique Ligands	SO4
Unique branched monosaccharides	GLC

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5ZNY \| pdb_00005zny	Download File View File

Structure of mDR3_DD-C363G with MBP tag

Yin, X., Jin, T.

(2019) FEBS J 286: 2593-2610

Released	2019-04-17
Method	X-RAY DIFFRACTION 2.74 Å
Organisms	Escherichia coli K-12 Mus musculus
Macromolecule	Maltose-binding periplasmic protein,Tumor necrosis factor receptor superfamily, member 25 (protein)
Unique Ligands	SO4

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5ZNZ \| pdb_00005znz	Download File View File

Structure of mDR3 DD with MBP tag mutant-I387V

Jin, T., Yin, X.

(2019) FEBS J 286: 2593-2610

Released	2019-04-17
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Escherichia coli K-12 Mus musculus
Macromolecule	Maltose-binding periplasmic protein,Tumor necrosis factor receptor superfamily, member 25 (protein)
Unique Ligands	SO4

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6C27 \| pdb_00006c27	Download File View File

SAM-III riboswitch ON-state

Grigg, J.C., Price, I.R., Ke, A.

To be published

Released	2019-01-09
Method	X-RAY DIFFRACTION 3.601 Å
Organisms	Enterococcus faecalis
Macromolecule	SAM-III riboswitch (nucleic acid)
Unique Ligands	NCO

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6IEW \| pdb_00006iew	Download File View File

The crystal structure of the dNxf2 UBA domain in complex with Panoramix

Huang, Y., Cheng, S.

(2019) Nat Cell Biol 21: 1261-1272

Released	2019-08-21
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Drosophila melanogaster
Macromolecule	Fusion protein of Nuclear RNA export factor 2 and Protein panoramix (protein)
Unique Ligands	GOL

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6IHJ \| pdb_00006ihj	Download File View File

Crystal structure of Drosophila Nxf1 NTF2 domain in complex with Nxt1/p15

Huang, Y., Yuan, X.

(2019) Nat Cell Biol 21: 1261-1272

Released	2019-08-14
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Drosophila melanogaster
Macromolecule	NTF2-related export protein (protein) Nuclear RNA export factor 1 (protein)

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6J02 \| pdb_00006j02	Download File View File

Crystal structure of the SRCR domain of mouse SCARA1

Cheng, C., Hu, Z.

(2019) J Biological Chem 294: 18881-18897

Released	2019-11-13
Method	X-RAY DIFFRACTION 1.803 Å
Organisms	Mus musculus
Macromolecule	Macrophage scavenger receptor types I and II (protein)
Unique Ligands	CA

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6JVF \| pdb_00006jvf	Download File View File

Crystal structure of human apo MTH1

Peng, C., Cheng, Y.S.

(2021) Bioorg Chem 110: 104813-104813

Released	2020-10-28
Method	X-RAY DIFFRACTION 1.73 Å
Organisms	Homo sapiens
Macromolecule	7,8-dihydro-8-oxoguanine triphosphatase (protein)

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6JVG \| pdb_00006jvg	Download File View File

Crystal structure of human MTH1 in complex with compound MI0639

Peng, C., Cheng, Y.S.

(2021) Bioorg Chem 110: 104813-104813

Released	2020-10-28
Method	X-RAY DIFFRACTION 1.844 Å
Organisms	Homo sapiens
Macromolecule	7,8-dihydro-8-oxoguanine triphosphatase (protein)
Unique Ligands	95F

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6JVH \| pdb_00006jvh	Download File View File

Crystal structure of human MTH1 in complex with compound MI0320

Peng, C., Cheng, Y.S.

(2021) Bioorg Chem 110: 104813-104813

Released	2020-10-28
Method	X-RAY DIFFRACTION 2.04 Å
Organisms	Homo sapiens
Macromolecule	7,8-dihydro-8-oxoguanine triphosphatase (protein)
Unique Ligands	95L

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6JVI \| pdb_00006jvi	Download File View File

Crystal structure of human MTH1 in complex with compound MI0861

Peng, C., Cheng, Y.S.

(2021) Bioorg Chem 110: 104813-104813

Released	2020-10-28
Method	X-RAY DIFFRACTION 2.249 Å
Organisms	Homo sapiens
Macromolecule	7,8-dihydro-8-oxoguanine triphosphatase (protein)
Unique Ligands	95R, SO4

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6JVJ \| pdb_00006jvj	Download File View File

Crystal structure of human MTH1 in complex with compound MI1006

Peng, C., Li, Y.H., Cheng, Y.S.

(2021) Bioorg Chem 110: 104813-104813

Released	2020-10-28
Method	X-RAY DIFFRACTION 2.297 Å
Organisms	Homo sapiens
Macromolecule	7,8-dihydro-8-oxoguanine triphosphatase (protein)
Unique Ligands	C9L