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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Tunnicliffe, R.B."

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Search Summary

This query matches 35 Structures.

Refinements

Structure Determination Methodology

experimental (35)

Scientific Name of Source Organism

	Mycobacterium tuberculosis H37Rv (15)
	Human alphaherpesvirus 1 (3)
	Human alphaherpesvirus 1 strain 17 (3)
	Cellvibrio japonicus (2)
	Cereibacter sphaeroides (2)
	Herpesvirus saimiri (strain 11) (2)
	Mus musculus (2)
	Mycobacterium tuberculosis (2)
	Piromyces sp. 'equi (2)
	Streptococcus sp. (2)

More...

Taxonomy

	Bacteria (24)
	Duplodnaviria (8)
	Eukaryota (5)
	other sequences (1)

Experimental Method

	X-RAY DIFFRACTION (25)
	SOLUTION NMR (10)

Polymer Entity Type

	Protein (35)
	DNA (2)
	RNA (1)

Refinement Resolution (Å)

	1.0 - 1.5 (1)
	1.5 - 2.0 (14)
	2.0 - 2.5 (8)
	2.5 - 3.0 (2)

Release Date

	2005 - 2009 (8)
	2010 - 2014 (3)
	2015 - 2019 (7)
	2020 - 2024 (15)
	2025 - 2029 (2)

Enzyme Classification Name

	Oxidoreductases (17)
	Hydrolases (2)
	Transferases (1)

Membrane Protein Annotation

	MemProtMD (2)
	PDBTM (2)
	OPM (1)

Symmetry Type

	Asymmetric (30)
	Cyclic (5)

SCOP Classification

Alpha and beta proteins (a+b) (2)

AllSelected

1 to 25 of 35 Structures

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2BGO \| pdb_00002bgo	Download File View File

Mannan Binding Module from Man5C

Tunnicliffe, R.B., Bolam, D.N., Pell, G., Gilbert, H.J., Williamson, M.P.

(2005) J Mol Biology 347: 287

Released	2005-03-09
Method	SOLUTION NMR
Organisms	Cellvibrio japonicus
Macromolecule	ENDO-B1,4-MANNANASE 5C (protein)

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2BGP \| pdb_00002bgp	Download File View File

Mannan Binding Module from Man5C in bound conformation

Tunnicliffe, R.B., Bolam, D.N., Pell, G., Gilbert, H.J., Williamson, M.P.

(2005) J Mol Biology 347: 287

Released	2005-03-09
Method	SOLUTION NMR
Organisms	Cellvibrio japonicus
Macromolecule	ENDO-B1,4-MANNANASE 5C (protein)

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2ITA \| pdb_00002ita	Download File View File

Solution structure of PufX from Rhodobacter sphaeroides

Tunnicliffe, R.B., Ratcliffe, E.C., Hunter, C.N., Williamson, M.P.

(2006) FEBS Lett 580: 6967-6971

Released	2006-12-26
Method	SOLUTION NMR
Organisms	Cereibacter sphaeroides
Macromolecule	Intrinsic membrane protein pufX (protein)

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2J4M \| pdb_00002j4m	Download File View File

Double dockerin from Piromyces equi Cel45A

Nagy, T., Tunnicliffe, R.B., Higgins, L.D., Walters, C., Gilbert, H.J., Williamson, M.P.

(2007) J Mol Biology 373: 612

Released	2007-09-25
Method	SOLUTION NMR
Organisms	Piromyces sp. 'equi
Macromolecule	ENDOGLUCANASE 45A (protein)

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2J4N \| pdb_00002j4n	Download File View File

Double dockerin from Piromyces equi Cel45A

Nagy, T., Tunnicliffe, R.B., Higgins, L.D., Walters, C., Gilbert, H.J., Williamson, M.P.

(2007) J Mol Biology 373: 612

Released	2007-09-25
Method	SOLUTION NMR
Organisms	Piromyces sp. 'equi
Macromolecule	ENDOGLUCANASE 45A (protein)

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2J52 \| pdb_00002j52	Download File View File

Solution Structure of GB1 domain Protein G and low and high pressure.

Wilton, D.J., Tunnicliffe, R.B., Kamatari, Y.O., Akasaka, K., Williamson, M.P.

(2008) Proteins 71: 1432

Released	2007-09-25
Method	SOLUTION NMR
Organisms	Streptococcus sp.
Macromolecule	IMMUNOGLOBULIN G-BINDING PROTEIN G (protein)

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2J53 \| pdb_00002j53	Download File View File

Solution Structure of GB1 domain Protein G and low and high pressure.

Wilton, D.J., Tunnicliffe, R.B., Kamatari, Y.O., Akasaka, K., Williamson, M.P.

(2008) Proteins 71: 1432

Released	2007-09-25
Method	SOLUTION NMR
Organisms	Streptococcus sp.
Macromolecule	IMMUNOGLOBULIN G-BINDING PROTEIN G (protein)

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2KT5 \| pdb_00002kt5	Download File View File

RRM domain of mRNA export adaptor REF2-I bound to HSV-1 ICP27 peptide

Tunnicliffe, N.B., Golovanov, A.P., Wilson, S.A., Hautbergue, G.M.

(2011) PLoS Pathog 7: e1001244-e1001244

Released	2011-01-12
Method	SOLUTION NMR
Organisms	Human alphaherpesvirus 1 Mus musculus
Macromolecule	ICP27 (protein) RNA and export factor-binding protein 2 (protein)

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2NRG \| pdb_00002nrg	Download File View File

Solution Structure of PufX from Rhodobacter Sphaeroides (minimised average)

Tunnicliffe, R.B., Ratcliffe, E.C., Hunter, C.N., Williamson, M.P.

(2006) FEBS Lett 580: 6967-6971

Released	2006-12-26
Method	SOLUTION NMR
Organisms	Cereibacter sphaeroides
Macromolecule	Intrinsic membrane protein pufX (protein)

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2WZ8 \| pdb_00002wz8	Download File View File

Family 35 carbohydrate binding module from Clostridium thermocellum

Gloster, T.M., Davies, G.J., Fontes, C.M., Gilbert, H.J.

(2010) Biochemistry 49: 6193

Released	2010-07-14
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Acetivibrio thermocellus
Macromolecule	CELLULOSOME PROTEIN DOCKERIN TYPE I (protein)
Unique Ligands	CA, MG

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2YKA \| pdb_00002yka	Download File View File

RRM domain of mRNA export adaptor REF2-I bound to HVS ORF57 peptide

Tunnicliffe, R.B., Hautbergue, G.M., Kalra, P., Wilson, S.A., Golovanov, A.P.

(2014) PLoS Pathog 10: 3907

Released	2012-06-13
Method	SOLUTION NMR
Organisms	Mus musculus Saimiriine gammaherpesvirus 2
Macromolecule	52 KDA IMMEDIATE-EARLY PHOSPHOPROTEIN (protein) RNA AND EXPORT FACTOR-BINDING PROTEIN 2 (protein)

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4YXP \| pdb_00004yxp	Download File View File

The structure of the folded domain of the signature multifunctional protein ICP27 from herpes simplex virus-1 reveals an intertwined dimer.

Tunnicliffe, R.B., Schacht, M., Levy, C.W., Jowitt, T.A., Sandri-Goldin, R.M., Golovanov, A.P.

(2015) Sci Rep 5: 11234-11234

Released	2015-06-17
Method	X-RAY DIFFRACTION 1.92 Å
Organisms	Human alphaherpesvirus 1 strain 17
Macromolecule	mRNA export factor (protein)
Unique Ligands	ZN

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5MHJ \| pdb_00005mhj	Download File View File

ICP4 DNA-binding domain, lacking intrinsically disordered region, in complex with 12mer DNA duplex from its own promoter

Tunnicliffe, R.B., Lockhart-Cairns, M.P., Levy, C., Mould, P., Jowitt, T.A., Sito, H., Baldock, C., Sandri-Goldin, R.M., Golovanov, A.P.

(2017) Nucleic Acids Res 45: 8064-8078

Released	2017-05-24
Method	X-RAY DIFFRACTION 2.117 Å
Organisms	Human alphaherpesvirus 1 Human alphaherpesvirus 1 strain 17
Macromolecule	Major viral transcription factor ICP4 (protein) DNA (5'-D(PCPGPAPTPCPGPTPCP*C)-3') (nucleic acid)
Unique Ligands	ACY, CL

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5MHK \| pdb_00005mhk	Download File View File

ICP4 DNA-binding domain in complex with 19mer DNA duplex from its own promoter

Tunnicliffe, R.B., Lockhart-Cairns, M.P., Levy, C., Mould, P., Jowitt, T.A., Sito, H., Baldock, C., Sandri-Goldin, R.M., Golovanov, A.P.

(2017) Nucleic Acids Res 45: 8064-8078

Released	2017-05-24
Method	X-RAY DIFFRACTION 2.28 Å
Organisms	Human alphaherpesvirus 1
Macromolecule	ICP4 DNA BINDING DOMAIN (protein) RS1 (protein) DNA (5'-D(GPCPTPCPCPGPTPGPTPGPGPAPCPGPAPTPCPGP*G)-3') (nucleic acid)
Unique Ligands	CL, MG, SO4

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6FAD \| pdb_00006fad	Download File View File

SR protein kinase 1 (SRPK1) in complex with the RGG-box of HSV1 ICP27

Tunnicliffe, R.B., Levy, C., Mould, A.P., Mckenzie, E.A., Sandri-Goldin, R.M., Golovanov, A.P.

(2019) mBio 10:

Released	2019-09-25
Method	X-RAY DIFFRACTION 2.801 Å
Organisms	Homo sapiens Human alphaherpesvirus 1 strain 17
Macromolecule	SRSF protein kinase 1 (protein) mRNA export factor (protein)
Unique Ligands	PO4

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6HAT \| pdb_00006hat	Download File View File

Globular domain of herpesvirus saimiri ORF57

Tunnicliffe, R.B., Levy, C., Ruiz Nivia, H.D., Sandri-Goldin, R.M., Golovanov, A.P.

(2019) Nucleic Acids Res 47: 1987-2001

Released	2018-11-21
Method	X-RAY DIFFRACTION 1.856 Å
Organisms	Herpesvirus saimiri (strain 11)
Macromolecule	mRNA export factor ICP27 homolog (protein)
Unique Ligands	ACT, ZN

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6HAU \| pdb_00006hau	Download File View File

KSHV PAN RNA Mta-response element fragment complexed with the globular domain of herpesvirus saimiri ORF57

Tunnicliffe, R.B., Levy, C., Ruiz Nivia, H.D., Sandri-Goldin, R.M., Golovanov, A.P.

(2019) Nucleic Acids Res 47: 1987-2001

Released	2018-11-21
Method	X-RAY DIFFRACTION 1.86 Å
Organisms	Herpesvirus saimiri (strain 11) Human gammaherpesvirus 8
Macromolecule	mRNA export factor ICP27 homolog (protein) MRE fragment of PAN RNA (nucleic acid)
Unique Ligands	ACT, ZN

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6QB2 \| pdb_00006qb2	Download File View File

Crystal structure of the cystatin-based engineered protein scaffold SQT-1C

Levy, C.W.

(2019) Sci Rep 9: 9067-9067

Released	2019-07-03
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	synthetic construct
Macromolecule	Monomer of SQT-1C (protein)

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7NQM \| pdb_00007nqm	Download File View File

Mycobacterium tuberculosis Cytochrome P450 CYP121 in complex with lead compound 10

Selvam, I.R.

(2022) Eur J Med Chem 230: 114105-114105

Released	2022-02-02
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	Mycocyclosin synthase (protein)
Unique Ligands	CL, HEC, MES, SO4, UMZ

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7NQN \| pdb_00007nqn	Download File View File

Mycobacterium tuberculosis Cytochrome P450 CYP121 in complex with lead compound 14

Selvam, I.R.

(2022) Eur J Med Chem 230: 114105-114105

Released	2022-02-02
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	Mycocyclosin synthase (protein)
Unique Ligands	CL, HEM, MES, SO4, UMT

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7NQO \| pdb_00007nqo	Download File View File

Mycobacterium tuberculosis Cytochrome P450 CYP121 in complex with lead compound 21

Selvam, I.R.

(2022) Eur J Med Chem 230: 114105-114105

Released	2022-02-02
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	Mycocyclosin synthase (protein)
Unique Ligands	CL, DMS, HEC, MES, SO4, ULZ

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7QJL \| pdb_00007qjl	Download File View File

Crystal structure of CYP142 from Mycobacterium tuberculosis in complex with an inhibitor

Snee, M., Levy, C., Katariya, M.

(2023) Chemistry 29: e202203868-e202203868

Released	2022-12-28
Method	X-RAY DIFFRACTION 1.38 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	Steroid C26-monooxygenase (protein)
Unique Ligands	ACT, BR, DQE, HEM

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7QKE \| pdb_00007qke	Download File View File

Crystal structure of CYP125 from Mycobacterium tuberculosis in complex with inhibitor (surface entropy reduction mutant)

Snee, M., Tunnicliffe, R., Leys, D., Levy, C., Katariya, M.

(2023) Chemistry 29: e202203868-e202203868

Released	2022-12-28
Method	X-RAY DIFFRACTION 2.3 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	Steroid C26-monooxygenase (protein)
Unique Ligands	E1V, HEM

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7QNN \| pdb_00007qnn	Download File View File

Crystal structure of CYP125 from Mycobacterium tuberculosis in complex with inhibitor (surface entropy reduction mutant)

Snee, M., Tunnicliffe, R., Leys, D., Levy, C., Katariya, M.

(2023) Chemistry 29: e202203868-e202203868

Released	2022-12-28
Method	X-RAY DIFFRACTION 2.47 Å
Organisms	Mycobacterium tuberculosis
Macromolecule	Steroid C26-monooxygenase (protein)
Unique Ligands	E93, HEM

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7QWN \| pdb_00007qwn	Download File View File

Crystal structure of CYP125 from Mycobacterium tuberculosis in complex with an inhibitor

Snee, M., Katariya, M., Levy, C., Leys, D.

(2023) Chemistry 29: e202203868-e202203868

Released	2023-02-01
Method	X-RAY DIFFRACTION 1.93 Å
Organisms	Mycobacterium tuberculosis H37Rv
Macromolecule	Steroid C26-monooxygenase (protein)
Unique Ligands	CL, DQE, HEM, SO4

1 to 25 of 35 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

2BGO | pdb_00002bgo

2BGP | pdb_00002bgp

2ITA | pdb_00002ita

2J4M | pdb_00002j4m

2J4N | pdb_00002j4n

2J52 | pdb_00002j52

2J53 | pdb_00002j53

2KT5 | pdb_00002kt5

2NRG | pdb_00002nrg

2WZ8 | pdb_00002wz8

2YKA | pdb_00002yka

4YXP | pdb_00004yxp

5MHJ | pdb_00005mhj

5MHK | pdb_00005mhk

6FAD | pdb_00006fad

6HAT | pdb_00006hat

6HAU | pdb_00006hau

6QB2 | pdb_00006qb2

7NQM | pdb_00007nqm

7NQN | pdb_00007nqn

7NQO | pdb_00007nqo

7QJL | pdb_00007qjl

7QKE | pdb_00007qke

7QNN | pdb_00007qnn

7QWN | pdb_00007qwn