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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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Search Summary

This query matches 52 Structures.

Refinements

Structure Determination Methodology

experimental (52)

Scientific Name of Source Organism

	Escherichia coli K-12 (23)
	Mycothermus thermophilus (14)
	Escherichia coli (5)
	Geobacillus sp. PA-3 (2)
	Mycobacterium tuberculosis H37Rv (2)
	Penicillium janthinellum (2)
	Corynebacterium glutamicum (1)
	Escherichia coli BW25113 (1)
	Geobacillus stearothermophilus (1)
	Geobacillus thermodenitrificans NG80-2 (1)

More...

Taxonomy

	Bacteria (35)
	Eukaryota (17)

Experimental Method

	X-RAY DIFFRACTION (44)
	ELECTRON MICROSCOPY (8)

Polymer Entity Type

Protein (52)

Refinement Resolution (Å)

	1.0 - 1.5 (6)
	1.5 - 2.0 (32)
	2.0 - 2.5 (4)
	2.5 - 3.0 (6)
	3.0 - 3.5 (3)
	3.5 - 4.0 (1)

Release Date

	2000 - 2004 (4)
	2005 - 2009 (2)
	2010 - 2014 (25)
	2015 - 2019 (11)
	2020 - 2024 (9)
	2025 - 2029 (1)

Enzyme Classification Name

	Oxidoreductases (43)
	Translocases (4)
	Hydrolases (1)

Membrane Protein Annotation

	PDBTM (10)
	MemProtMD (9)
	OPM (8)
	mpstruc (7)

Symmetry Type

	Dihedral (42)
	Asymmetric (9)
	Cyclic (1)

SCOP Classification

	Alpha and beta proteins (a/b) (24)
	Multi-domain proteins (alpha and beta) (23)

AllSelected

1 to 25 of 52 Structures

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1GGE \| pdb_00001gge	Download File View File

CRYSTAL STRUCTURE OF CATALASE HPII FROM ESCHERICHIA COLI, NATIVE STRUCTURE AT 1.9 A RESOLUTION.

Melik-Adamyan, W.R., Bravo, J., Carpena, X., Switala, J., Mate, M.J., Fita, I., Loewen, P.C.

(2001) Proteins 44: 270-281

Released	2000-08-30
Method	X-RAY DIFFRACTION 1.89 Å
Organisms	Escherichia coli
Macromolecule	PROTEIN (CATALASE HPII) (protein)
Unique Ligands	HDD

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1GGJ \| pdb_00001ggj	Download File View File

CRYSTAL STRUCTURE OF CATALASE HPII FROM ESCHERICHIA COLI, ASN201ALA VARIANT.

Melik-Adamyan, W.R., Bravo, J., Carpena, X., Switala, J., Mate, M.J., Fita, I., Loewen, P.C.

(2001) Proteins 44: 270-281

Released	2000-08-30
Method	X-RAY DIFFRACTION 1.92 Å
Organisms	Escherichia coli
Macromolecule	CATALASE HPII (protein)
Unique Ligands	HDD

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1P81 \| pdb_00001p81	Download File View File

Crystal structure of the D181E variant of catalase HPII from E. coli

Chelikani, P., Carpena, X., Fita, I., Loewen, P.C.

(2003) J Biological Chem 278: 31290-31296

Released	2003-09-09
Method	X-RAY DIFFRACTION 1.81 Å
Organisms	Escherichia coli
Macromolecule	Catalase HPII (protein)
Unique Ligands	HDD

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1SY7 \| pdb_00001sy7	Download File View File

Crystal structure of the catalase-1 from Neurospora crassa, native structure at 1.75A resolution.

Diaz, A., Horjales, E., Rudino-Pinera, E., Arreola, R., Hansberg, W.

(2004) J Mol Biology 342: 971-985

Released	2004-10-12
Method	X-RAY DIFFRACTION 1.75 Å
Organisms	Neurospora crassa
Macromolecule	Catalase 1 (protein)
Unique Ligands	HDD, HEM

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1YE9 \| pdb_00001ye9	Download File View File

Crystal structure of proteolytically truncated catalase HPII from E. coli

Loewen, P.C., Chelikani, P., Carpena, X., Fita, I., Perez-Luque, R., Donald, L.J., Switala, J., Duckworth, H.W.

(2005) Biochemistry 44: 5597-5605

Released	2005-04-26
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Escherichia coli
Macromolecule	catalase HPII (protein)
Unique Ligands	HDD

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2IUF \| pdb_00002iuf	Download File View File

The structures of Penicillium vitale catalase: resting state, oxidised state (compound I) and complex with aminotriazole

Murshudov, G., Borovik, A., Grebenko, A., Barynin, V., Vagin, A., Melik-Adamyan, W.

(2007) J Am Chem Soc 129: 4193

Released	2006-07-10
Method	X-RAY DIFFRACTION 1.71 Å
Organisms	Penicillium janthinellum
Macromolecule	CATALASE (protein)
Unique Ligands	ACT, CA, F50, HDD, MPD, NAG, O
Unique branched monosaccharides	NAG

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2XF2 \| pdb_00002xf2	Download File View File

PVC-AT

Borovik, A., Melik-Adamyan, W.R.

(2011) Crystallogr Rep 56: 590

Released	2010-06-16
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Penicillium janthinellum
Macromolecule	CATALASE (protein)
Unique Ligands	3TR, CA, HDD, NAG

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3P9P \| pdb_00003p9p	Download File View File

Structure of I274V variant of E. coli KatE

Loewen, P.C., Jha, V., Louis, S., Chelikani, P., Carpena, X., Fita, I.

(2011) Biochemistry 50: 2101-2110

Released	2010-12-22
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Escherichia coli K-12
Macromolecule	Catalase HPII (protein)
Unique Ligands	HDD, HDE, HEM

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3P9Q \| pdb_00003p9q	Download File View File

Structure of I274C variant of E. coli KatE

Loewen, P.C., Jha, V., Louis, S., Chelikani, P., Carpena, X., Fita, I.

(2011) Biochemistry 50: 2101-2110

Released	2010-12-22
Method	X-RAY DIFFRACTION 1.48 Å
Organisms	Escherichia coli K-12
Macromolecule	Catalase HPII (protein)
Unique Ligands	H2S, HDD, HDE

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3P9R \| pdb_00003p9r	Download File View File

Structure of I274G variant of E. coli KatE

Loewen, P.C., Jha, V., Louis, S., Chelikani, P., Carpena, X., Fita, I.

(2011) Biochemistry 50: 2101-2110

Released	2010-12-22
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Escherichia coli K-12
Macromolecule	Catalase HPII (protein)
Unique Ligands	HDD

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3P9S \| pdb_00003p9s	Download File View File

Structure of I274A variant of E. coli KatE

Loewen, P.C., Jha, V., Louis, S., Chelikani, P., Carpena, X., Fita, I.

(2011) Biochemistry 50: 2101-2110

Released	2010-12-22
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Escherichia coli K-12
Macromolecule	Catalase HPII (protein)
Unique Ligands	HDD, HDE

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3PQ2 \| pdb_00003pq2	Download File View File

Structure of I274C variant of E. coli KatE[] - Images 1-6

Loewen, P.C., Jha, V., Louis, S., Chelikani, P., Carpena, X., Fita, I.

(2011) Biochemistry 50: 2101-2110

Released	2010-12-22
Method	X-RAY DIFFRACTION 1.79 Å
Organisms	Escherichia coli K-12
Macromolecule	Catalase HPII (protein)
Unique Ligands	H2S, HDD, HDE

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3PQ3 \| pdb_00003pq3	Download File View File

Structure of I274C variant of E. coli KatE[] - Images 7-12

Loewen, P.C., Jha, V., Louis, S., Chelikani, P., Carpena, X., Fita, I.

(2011) Biochemistry 50: 2101-2110

Released	2010-12-22
Method	X-RAY DIFFRACTION 1.79 Å
Organisms	Escherichia coli K-12
Macromolecule	Catalase HPII (protein)
Unique Ligands	H2S, HDD, HDE

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3PQ4 \| pdb_00003pq4	Download File View File

Structure of I274C variant of E. coli KatE[] - Images 13-18

Loewen, P.C., Jha, V., Louis, S., Chelikani, P., Carpena, X., Fita, I.

(2011) Biochemistry 50: 2101-2110

Released	2010-12-22
Method	X-RAY DIFFRACTION 1.79 Å
Organisms	Escherichia coli K-12
Macromolecule	Catalase HPII (protein)
Unique Ligands	H2S, HDD, HDE

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3PQ5 \| pdb_00003pq5	Download File View File

Structure of I274C variant of E. coli KatE[] - Images 19-24

Loewen, P.C., Jha, V., Louis, S., Chelikani, P., Carpena, X., Fita, I.

(2011) Biochemistry 50: 2101-2110

Released	2010-12-22
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Escherichia coli K-12
Macromolecule	Catalase HPII (protein)
Unique Ligands	H2S, HDD, HDE

Explore in 3D

3PQ6 \| pdb_00003pq6	Download File View File

Structure of I274C variant of E. coli KatE[] - Images 25-30

Loewen, P.C., Jha, V., Louis, S., Chelikani, P., Carpena, X., Fita, I.

(2011) Biochemistry 50: 2101-2110

Released	2010-12-22
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Escherichia coli K-12
Macromolecule	Catalase HPII (protein)
Unique Ligands	H2S, HDD, HDE

Explore in 3D

3PQ7 \| pdb_00003pq7	Download File View File

Structure of I274C variant of E. coli KatE[] - Images 31-36

Loewen, P.C., Jha, V., Louis, S., Chelikani, P., Carpena, X., Fita, I.

(2011) Biochemistry 50: 2101-2110

Released	2010-12-22
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Escherichia coli K-12
Macromolecule	Catalase HPII (protein)
Unique Ligands	H2S, HDD, HDE

Explore in 3D

3PQ8 \| pdb_00003pq8	Download File View File

Structure of I274C variant of E. coli KatE[] - Images 37-42

Loewen, P.C., Jha, V., Louis, S., Chelikani, P., Carpena, X., Fita, I.

(2011) Biochemistry 50: 2101-2110

Released	2010-12-22
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Escherichia coli K-12
Macromolecule	Catalase HPII (protein)
Unique Ligands	H2S, HDD, HDE

Explore in 3D

4AUE \| pdb_00004aue	Download File View File

Crystal structure, recombinant expression and mutagenesis studies of the bifunctional catalase-phenol oxidase from Scytalidium thermophilum

Yuzugullu, Y., Trinh, C.H., Smith, M.A., Pearson, A.R., Phillips, S.E.V., Sutay Kocabas, D., Bakir, U., Ogel, Z.B., McPherson, M.J.

(2013) Acta Crystallogr D Biol Crystallogr 69: 398

Released	2013-02-27
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Mycothermus thermophilus
Macromolecule	CATALASE-PHENOL OXIDASE (protein)
Unique Ligands	CA, HDD, NAG
Unique branched monosaccharides	NAG

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4AUM \| pdb_00004aum	Download File View File

Crystal structure, recombinant expression and mutagenesis studies of the bifunctional catalase-phenol oxidase from Scytalidium thermophilum

Yuzugullu, Y., Trinh, C.H., Smith, M.A., Pearson, A.R., Phillips, S.E.V., Sutay Kocabas, D., Bakir, U., Ogel, Z.B., McPherson, M.J.

(2013) Acta Crystallogr D Biol Crystallogr 69: 398

Released	2013-02-27
Method	X-RAY DIFFRACTION 1.4 Å
Organisms	Mycothermus thermophilus
Macromolecule	CATALASE-PHENOL OXIDASE (protein)
Unique Ligands	1PE, CA, HDD

Explore in 3D

4AUN \| pdb_00004aun	Download File View File

Crystal structure, recombinant expression and mutagenesis studies of the bifunctional catalase-phenol oxidase from Scytalidium thermophilum

Yuzugullu, Y., Trinh, C.H., Smith, M.A., Pearson, A.R., Phillips, S.E.V., Sutay Kocabas, D., Bakir, U., Ogel, Z.B., McPherson, M.J.

(2013) Acta Crystallogr D Biol Crystallogr 69: 398

Released	2013-02-27
Method	X-RAY DIFFRACTION 1.92 Å
Organisms	Mycothermus thermophilus
Macromolecule	CATALASE-PHENOL OXIDASE (protein)
Unique Ligands	CA, HDD

Explore in 3D

4B31 \| pdb_00004b31	Download File View File

Probing the active center of catalase-phenol oxidase from Scytalidium thermophilum

Yuzugullu, Y., Trinh, C.H., Pearson, A.R., Ogel, Z.B., McPherson, M.J.

(2013) Acta Crystallogr Sect F Struct Biol Cryst Commun 69: 369

Released	2013-04-10
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Mycothermus thermophilus
Macromolecule	CATALASE-PHENOL OXIDASE (protein)
Unique Ligands	CA, HDD

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4B40 \| pdb_00004b40	Download File View File

Probing the active center of catalase-phenol oxidase from Scytalidium thermophilum

Yuzugullu, Y., Trinh, C.H., Pearson, A.R., Ogel, Z.B., McPherson, M.J.

(2013) Acta Crystallogr Sect F Struct Biol Cryst Commun 69: 369

Released	2013-04-10
Method	X-RAY DIFFRACTION 1.93 Å
Organisms	Mycothermus thermophilus
Macromolecule	CATALASE-PHENOL OXIDASE (protein)
Unique Ligands	CA, HDD

Explore in 3D

4B5K \| pdb_00004b5k	Download File View File

Probing the active center of catalase-phenol oxidase from Scytalidium thermophilum

Yuzugullu, Y., Trinh, C.H., Pearson, A.R., Ogel, Z.B., McPherson, M.J.

(2013) Acta Crystallogr Sect F Struct Biol Cryst Commun 69: 369

Released	2013-04-10
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Mycothermus thermophilus
Macromolecule	CATALASE-PHENOL OXIDASE (protein)
Unique Ligands	CA, HDD

Explore in 3D

4B7A \| pdb_00004b7a	Download File View File

Probing the active center of catalase-phenol oxidase from Scytalidium thermophilum

Yuzugullu, Y., Trinh, C.H., Pearson, A.R., Ogel, Z.B., McPherson, M.J.

To be published

Released	2013-09-04
Method	X-RAY DIFFRACTION 1.95 Å
Organisms	Mycothermus thermophilus
Macromolecule	CATALASE-PHENOL OXIDASE (protein)
Unique Ligands	3TR, CA, HDD

1 to 25 of 52 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Membrane Protein Annotation

Symmetry Type

SCOP Classification

1GGE | pdb_00001gge

1GGJ | pdb_00001ggj

1P81 | pdb_00001p81

1SY7 | pdb_00001sy7

1YE9 | pdb_00001ye9

2IUF | pdb_00002iuf

2XF2 | pdb_00002xf2

3P9P | pdb_00003p9p

3P9Q | pdb_00003p9q

3P9R | pdb_00003p9r

3P9S | pdb_00003p9s

3PQ2 | pdb_00003pq2

3PQ3 | pdb_00003pq3

3PQ4 | pdb_00003pq4

3PQ5 | pdb_00003pq5

3PQ6 | pdb_00003pq6

3PQ7 | pdb_00003pq7

3PQ8 | pdb_00003pq8

4AUE | pdb_00004aue

4AUM | pdb_00004aum

4AUN | pdb_00004aun

4B31 | pdb_00004b31

4B40 | pdb_00004b40

4B5K | pdb_00004b5k

4B7A | pdb_00004b7a