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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Source Organism Taxonomy Name (Full Lineage) = "Streptococcus pyogenes M1 GAS"

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This query matches 22 Structures.

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Structure Determination Methodology

experimental (22)

Scientific Name of Source Organism

	Streptococcus pyogenes M1 GAS (22)
	Listeria phage LP-101 (2)
	Bacteriophage sp. (1)
	Listeria monocytogenes (1)
	Streptococcus pyogenes serotype M1 (1)

Taxonomy

	Bacteria (22)
	Duplodnaviria (2)
	unclassified bacterial viruses (1)

Experimental Method

	X-RAY DIFFRACTION (19)
	ELECTRON MICROSCOPY (3)

Polymer Entity Type

	Protein (22)
	RNA (4)

Refinement Resolution (Å)

	1.5 - 2.0 (4)
	2.0 - 2.5 (9)
	2.5 - 3.0 (5)
	3.0 - 3.5 (2)
	3.5 - 4.0 (2)

Release Date

	2005 - 2009 (12)
	2010 - 2014 (5)
	2015 - 2019 (5)

Enzyme Classification Name

	Hydrolases (10)
	Isomerases (3)
	Oxidoreductases (2)
	Ligases (1)
	Lyases (1)

Symmetry Type

	Asymmetric (14)
	Cyclic (9)
	Dihedral (3)

SCOP Classification

	Alpha and beta proteins (a/b) (5)
	Artifacts (6)
	Alpha and beta proteins (a+b) (2)
	All alpha proteins (3)
	Multi-domain proteins (alpha and beta) (1)
	All beta proteins (1)

AllSelected

1 to 22 of 22 Structures

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1YHF \| pdb_00001yhf	Download File View File

Crystal Structure of Conserved SPY1581 Protein of Unknown Function from Streptococcus pyogenes

Osipiuk, J., Lezondra, L., Moy, S., Collart, F., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2005-02-22
Method	X-RAY DIFFRACTION 2 Å
Organisms	Streptococcus pyogenes M1 GAS
Macromolecule	hypothetical protein SPy1581 (protein)

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1YS9 \| pdb_00001ys9	Download File View File

Crystal structure of phosphatase SPy1043 from Streptococcus pyogenes

Fedorov, A.A., Fedorov, E.V., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2005-02-15
Method	X-RAY DIFFRACTION 2.56 Å
Organisms	Streptococcus pyogenes M1 GAS
Macromolecule	Protein SPy1043 (protein)

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1Z0P \| pdb_00001z0p	Download File View File

Crystal structure of the Protein of Unknown Function SPY1572 from Streptococcus pyogenes

Zhang, R., Lezondra, L., Clancy, S., Collart, F., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2005-04-19
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Streptococcus pyogenes M1 GAS
Macromolecule	hypothetical protein SPy1572 (protein)

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2AHR \| pdb_00002ahr	Download File View File

Crystal Structures of 1-Pyrroline-5-Carboxylate Reductase from Human Pathogen Streptococcus pyogenes

Nocek, B., Lezondra, L., Holzle, D., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

(2005) J Mol Biology 354: 91-106

Released	2005-09-13
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Streptococcus pyogenes M1 GAS
Macromolecule	putative pyrroline carboxylate reductase (protein)
Unique Ligands	FMT, NA, NAP

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2AMF \| pdb_00002amf	Download File View File

Crystal structure of 1-Pyrroline-5-Carboxylate Reductase from Human Pathogen Streptococcus Pyogenes

Nocek, B., Lezondra, L., Holzle, D., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

(2005) J Mol Biology 354: 91-106

Released	2005-09-27
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Streptococcus pyogenes M1 GAS
Macromolecule	1-Pyrroline-5-Carboxylate reductase (protein)
Unique Ligands	NA, PRO

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2EWC \| pdb_00002ewc	Download File View File

Structure of hypothetical protein from Streptococcus pyogenes M1 GAS, member of highly conserved yjgF family of proteins

Nocek, B., Li, H., Clancy, S., Collart, F., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2005-12-13
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Streptococcus pyogenes M1 GAS
Macromolecule	conserved hypothetical protein (protein)
Unique Ligands	GOL

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2G7Z \| pdb_00002g7z	Download File View File

Conserved DegV-like Protein of Unknown Function from Streptococcus pyogenes M1 GAS Binds Long-chain Fatty Acids

Nocek, B., Volkart, L., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2006-04-04
Method	X-RAY DIFFRACTION 2.05 Å
Organisms	Streptococcus pyogenes M1 GAS
Macromolecule	conserved hypothetical protein SPy1493 (protein)
Unique Ligands	CL, GOL, HXA, TRS, ZN

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2GS8 \| pdb_00002gs8	Download File View File

Structure of mevalonate pyrophosphate decarboxylase from Streptococcus pyogenes

Cuff, M.E., Li, H., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2006-06-06
Method	X-RAY DIFFRACTION 1.5 Å
Organisms	Streptococcus pyogenes M1 GAS
Macromolecule	mevalonate pyrophosphate decarboxylase (protein)
Unique Ligands	ACY, EDO

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2OHG \| pdb_00002ohg	Download File View File

Structural Basis for Glutamte Racemase Inhibition

Kim, E.E.

(2007) J Mol Biology 372: 434-443

Released	2007-09-25
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Streptococcus pyogenes M1 GAS
Macromolecule	Glutamate racemase (protein)

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2OHO \| pdb_00002oho	Download File View File

Structural Basis for Glutamate Racemase Inhibitor

Kim, E.E.

(2007) J Mol Biology 372: 434-443

Released	2007-09-25
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Streptococcus pyogenes M1 GAS
Macromolecule	Glutamate Racemase (protein)
Unique Ligands	SO4

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2OHV \| pdb_00002ohv	Download File View File

Structural Basis for Glutamate Racemase Inhibition

Kim, E.E.

(2007) J Mol Biology 372: 434-443

Released	2007-09-25
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Streptococcus pyogenes M1 GAS
Macromolecule	Glutamate Racemase (protein)
Unique Ligands	NHL

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2OS3 \| pdb_00002os3	Download File View File

Structures of actinonin bound peptide deformylases from E. faecalis and S. pyogenes

Kim, E.E., Kim, K.-H., Moon, J.H., Choi, K., Lee, H.K., Parh, H.S.

To be published

Released	2008-03-04
Method	X-RAY DIFFRACTION 2.26 Å
Organisms	Streptococcus pyogenes M1 GAS
Macromolecule	Peptide deformylase (protein)
Unique Ligands	BB2, CO

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2WYH \| pdb_00002wyh	Download File View File

Structure of the Streptococcus pyogenes family GH38 alpha-mannosidase

Suits, M.D.L., Zhu, Y., Taylor, E.J., Zechel, D.L., Gilbert, H.J., Davies, G.J.

(2010) PLoS One 5: E9006

Released	2010-02-16
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Streptococcus pyogenes M1 GAS
Macromolecule	ALPHA-MANNOSIDASE (protein)
Unique Ligands	GOL, TRS, ZN

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2WYI \| pdb_00002wyi	Download File View File

Structure of the Streptococcus pyogenes family GH38 alpha-mannosidase complexed with swainsonine

Suits, M.D.L., Zhu, Y., Taylor, E.J., Zechel, D.L., Gilbert, H.J., Davies, G.J.

(2010) PLoS One 5: E9006

Released	2010-02-16
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Streptococcus pyogenes M1 GAS
Macromolecule	ALPHA-MANNOSIDASE (protein)
Unique Ligands	PG0, SWA, ZN

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3LGX \| pdb_00003lgx	Download File View File

Structure of probable D-alanine-poly(phosphoribitol) ligase subunit-1 from Streptococcus pyogenes with ATP

Ramagopal, U.A., Toro, R., Burley, S.K., Almo, S.C., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2010-03-02
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Streptococcus pyogenes M1 GAS
Macromolecule	D-alanine--poly(phosphoribitol) ligase subunit 1 (protein)
Unique Ligands	ATP

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3O5V \| pdb_00003o5v	Download File View File

The Crystal Structure of the Creatinase/Prolidase N-terminal domain of an X-PRO dipeptidase from Streptococcus pyogenes to 1.85A

Stein, A.J., Wu, R., Clancy, S., Joachimiak, A., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2010-08-11
Method	X-RAY DIFFRACTION 1.85 Å
Organisms	Streptococcus pyogenes M1 GAS
Macromolecule	X-PRO dipeptidase (protein)
Unique Ligands	CL, GOL

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3OVK \| pdb_00003ovk	Download File View File

Crystal structure of an XXA-pro aminopeptidase from Streptococcus pyogenes

Joachimiak, A., Duke, N.E.C., Volkart, L., Clancy, S., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2010-11-03
Method	X-RAY DIFFRACTION 2 Å
Organisms	Streptococcus pyogenes M1 GAS
Macromolecule	AMINOPEPTIDASE P, Xaa-Pro dipeptidase (protein)

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5FOO \| pdb_00005foo	Download File View File

6-phospho-beta-glucosidase

Jin, Y., Kwan, D.H., Withers, S.G., Davies, G.J.

(2016) FEBS Lett 590: 461

Released	2016-02-17
Method	X-RAY DIFFRACTION 2.1 Å
Organisms	Streptococcus pyogenes M1 GAS
Macromolecule	6-PHOSPHO-BETA-D GLYCOSIDASE (protein)
Unique Ligands	CL, EDO, JAZ, PO4, TRS

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5VZL \| pdb_00005vzl	Download File View File

cryo-EM structure of the Cas9-sgRNA-AcrIIA4 anti-CRISPR complex

Jiang, F., Liu, J.J., Nogales, E., Doudna, J.A.

(2017) Sci Adv 3: e1701620-e1701620

Released	2017-07-26
Method	ELECTRON MICROSCOPY 3.9 Å
Organisms	Bacteriophage sp. Streptococcus pyogenes M1 GAS
Macromolecule	CRISPR-associated endonuclease Cas9 (protein) phage anti-CRISPR AcrIIA4 (protein) single guide RNA (116-MER) (nucleic acid)

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6IFO \| pdb_00006ifo	Download File View File

Crystal structure of AcrIIA2-SpyCas9-sgRNA ternary complex

Liu, L., Wang, Y.

(2019) Mol Cell 73: 611-620.e3

Released	2019-01-23
Method	X-RAY DIFFRACTION 3.313 Å
Organisms	Listeria monocytogenes Streptococcus pyogenes M1 GAS Streptococcus pyogenes serotype M1
Macromolecule	AcrIIA2 (protein) CRISPR-associated endonuclease Cas9/Csn1 (protein) RNA (99-MER) (nucleic acid)

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6MCB \| pdb_00006mcb	Download File View File

CryoEM structure of AcrIIA2 in complex with CRISPR-Cas9

Jiang, F., Liu, J.J., Doudna, J.A.

(2019) Mol Cell 73: 601

Released	2019-01-16
Method	ELECTRON MICROSCOPY 3.4 Å
Organisms	Listeria phage LP-101 Streptococcus pyogenes M1 GAS
Macromolecule	Anti-CRISPR protein AcrIIA2 (protein) CRISPR-associated endonuclease Cas9 (protein) Single guide RNA (116-MER) (nucleic acid)

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6MCC \| pdb_00006mcc	Download File View File

CryoEM structure of AcrIIA2 homolog in complex with CRISPR-Cas9

Jiang, F., Liu, J.J., Doudna, J.A.

(2019) Mol Cell 73: 601

Released	2019-01-16
Method	ELECTRON MICROSCOPY 3.9 Å
Organisms	Listeria phage LP-101 Streptococcus pyogenes M1 GAS
Macromolecule	Anti-CRISPR AcrIIA2 Homolog (protein) CRISPR-associated endonuclease Cas9 (protein) Single guide RNA (116-MER) (nucleic acid)

1 to 22 of 22 Structures

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1YHF | pdb_00001yhf

1YS9 | pdb_00001ys9

1Z0P | pdb_00001z0p

2AHR | pdb_00002ahr

2AMF | pdb_00002amf

2EWC | pdb_00002ewc

2G7Z | pdb_00002g7z

2GS8 | pdb_00002gs8

2OHG | pdb_00002ohg

2OHO | pdb_00002oho

2OHV | pdb_00002ohv

2OS3 | pdb_00002os3

2WYH | pdb_00002wyh

2WYI | pdb_00002wyi

3LGX | pdb_00003lgx

3O5V | pdb_00003o5v

3OVK | pdb_00003ovk

5FOO | pdb_00005foo

5VZL | pdb_00005vzl

6IFO | pdb_00006ifo

6MCB | pdb_00006mcb

6MCC | pdb_00006mcc