Structure of hypothetical protein from Streptococcus pyogenes M1 GAS, member of highly conserved yjgF family of proteins
Nocek, B., Li, H., Clancy, S., Collart, F., Joachimiak, A.To be published.
Experimental Data Snapshot
wwPDB Validation 3D Report Full Report
Entity ID: 1 | |||||
---|---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details | Image |
conserved hypothetical protein | 126 | Streptococcus pyogenes M1 GAS | Mutation(s): 6 Gene Names: gi|13623057 | ![]() | |
UniProt | |||||
Find proteins for Q99XS4 (Streptococcus pyogenes serotype M1) Explore Q99XS4 Go to UniProtKB: Q99XS4 | |||||
Entity Groups | |||||
Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
UniProt Group | Q99XS4 | ||||
Sequence AnnotationsExpand | |||||
|
Ligands 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
GOL Query on GOL | M [auth A], N [auth A], O [auth G], P [auth H], Q [auth I] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |
Modified Residues 1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B, C, D, E | L-PEPTIDE LINKING | C5 H11 N O2 Se | MET |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 105.12 | α = 90 |
b = 131.994 | β = 90 |
c = 135.64 | γ = 90 |
Software Name | Purpose |
---|---|
REFMAC | refinement |
SBC-Collect | data collection |
HKL-2000 | data scaling |
HKL-3000 | phasing |
SHELXCD | phasing |
SOLVE | phasing |
RESOLVE | phasing |
ARP | model building |
CCP4 | phasing |