Download MendeleyCrystal structure of a GTP-binding protein from the hyperthermophilic archaeon Sulfolobus solfataricus.
Wu, H., Sun, L., Brouns, S.J., Fu, S., Akerboom, J., Li, X., Zhang, C., Rao, Z., Van der Oost, J.To be published.
2QTF | pdb_00002qtf
Crystal structure of a GTP-binding protein from the hyperthermophilic archaeon Sulfolobus solfataricus
- PDB DOI: https://doi.org/10.2210/pdb2QTF/pdb
- Classification: NUCLEOTIDE BINDING PROTEIN
- Organism(s): Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2007-08-02 Released: 2008-08-19
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.231 (Depositor)
- R-Value Work: 0.186 (Depositor), 0.190 (DCC)
- R-Value Observed: 0.186 (Depositor)
wwPDB Validation 3D Report Full Report
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| GTP-binding protein | 364 | N/A | Mutation(s): 0 Gene Names: hflX, SSO0269 |  | |
UniProt | |||||
Find proteins for Q980M3 (Saccharolobus solfataricus (strain ATCC 35092 / DSM 1617 / JCM 11322 / P2)) Explore Q980M3 Go to UniProtKB: Q980M3 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q980M3 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| CD Query on CD | B [auth A], C [auth A], D [auth A], E [auth A] | CADMIUM ION Cd WLZRMCYVCSSEQC-UHFFFAOYSA-N |  | ||
| SO4 Query on SO4 | F [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
| ACT Query on ACT | G [auth A], H [auth A], I [auth A] | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.231 (Depositor)
- R-Value Work: 0.186 (Depositor), 0.190 (DCC)
- R-Value Observed: 0.186 (Depositor)
Space Group: P 21 21 21
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 65.073 | α = 90 |
| b = 72.56 | β = 90 |
| c = 95.928 | γ = 90 |
| Software Name | Purpose |
|---|---|
| DENZO | data reduction |
| SCALEPACK | data scaling |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| CrystalClear | data collection |
| SHARP | phasing |
Entry History
Deposition Data
- Released Date: 2008-08-19 Deposition Author(s): Wu, H., Sun, L., Brouns, S.J., Fu, S., Rao, Z., Van der Oost, J.
Revision History (Full details and data files)
- Version 1.0: 2008-08-19
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2017-10-25
Changes: Refinement description - Version 1.3: 2024-02-21
Changes: Data collection, Database references, Derived calculations
