Download MendeleyCrystal structure of glutathione s-transferase from Rhodobacter sphaeroides
Eswaramoorthy, S., Burley, S.K., Swaminathan, S.To be published.
3LSZ
Crystal structure of glutathione s-transferase from Rhodobacter sphaeroides
- PDB DOI: https://doi.org/10.2210/pdb3LSZ/pdb
- Classification: TRANSFERASE
- Organism(s): Cereibacter sphaeroides 2.4.1
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2010-02-14 Released: 2010-03-23
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Free: 0.226 (Depositor), 0.220 (DCC)
- R-Value Work: 0.206 (Depositor), 0.200 (DCC)
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Glutathione S-transferase | 225 | Cereibacter sphaeroides 2.4.1 | Mutation(s): 0 Gene Names: RHOS4_23800, RSP_0769 EC: 2.5.1.18 |  | |
UniProt | |||||
Find proteins for Q3IZT6 (Cereibacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / CCUG 31486 / LMG 2827 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.)) Explore Q3IZT6 Go to UniProtKB: Q3IZT6 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | Q3IZT6 | ||||
Sequence AnnotationsExpand | |||||
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Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| GSH Query on GSH | E [auth A], G [auth B], J [auth C], L [auth D] | GLUTATHIONE C10 H17 N3 O6 S RWSXRVCMGQZWBV-WDSKDSINSA-N |  | ||
| TRS Query on TRS | F [auth A], H [auth B], K [auth C], M [auth D] | 2-AMINO-2-HYDROXYMETHYL-PROPANE-1,3-DIOL C4 H12 N O3 LENZDBCJOHFCAS-UHFFFAOYSA-O |  | ||
| GOL Query on GOL | I [auth B], N [auth D] | GLYCEROL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | ||
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B, C, D | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.70 Å
- R-Value Free: 0.226 (Depositor), 0.220 (DCC)
- R-Value Work: 0.206 (Depositor), 0.200 (DCC)
Space Group: C 1 2 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 167.92 | α = 90 |
| b = 50.398 | β = 125.51 |
| c = 133.228 | γ = 90 |
| Software Name | Purpose |
|---|---|
| CBASS | data collection |
| SHELXS | phasing |
| SHARP | phasing |
| CNS | refinement |
| HKL-2000 | data reduction |
| HKL-2000 | data scaling |
Entry History
Deposition Data
- Released Date: 2010-03-23 Deposition Author(s): Eswaramoorthy, S., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)
Revision History (Full details and data files)
- Version 1.0: 2010-03-23
Type: Initial release - Version 1.1: 2011-07-13
Changes: Version format compliance - Version 1.2: 2021-02-10
Changes: Database references, Derived calculations, Structure summary
