Download MendeleyCrystal structure of acetolactate decarboxylase from Enterobacter cloacae
Ji, F.L., Li, M.Y., Feng, Y.B.To be published.
5YHO
Crystal structure of acetolactate decarboxylase from Enterobacter cloacae
- PDB DOI: https://doi.org/10.2210/pdb5YHO/pdb
- Classification: METAL BINDING PROTEIN
- Organism(s): Klebsiella aerogenes
- Expression System: Escherichia coli
- Mutation(s): Yes
- Deposited: 2017-09-29 Released: 2018-10-10
- Funding Organization(s): National Science Foundation (China)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.40 Å
- R-Value Free: 0.272
- R-Value Work: 0.210
- R-Value Observed: 0.213
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Alpha-acetolactate decarboxylase | 238 | Klebsiella aerogenes | Mutation(s): 3 Gene Names: budA, aldC EC: 4.1.1.5 |  | |
UniProt | |||||
Find proteins for P05361 (Klebsiella aerogenes) Explore P05361 Go to UniProtKB: P05361 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P05361 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ZN (Subject of Investigation/LOI) Query on ZN | C [auth A], E [auth B] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |  | ||
| CL (Subject of Investigation/LOI) Query on CL | D [auth A], F [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.40 Å
- R-Value Free: 0.272
- R-Value Work: 0.210
- R-Value Observed: 0.213
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 45.832 | α = 90 |
| b = 59.981 | β = 108.17 |
| c = 80.818 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
| PHENIX | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2018-10-10 Deposition Author(s): Ji, F.L., Li, M.Y., Feng, Y.B.
| Funding Organization | Location | Grant Number |
|---|---|---|
| National Science Foundation (China) | China | 21506025 |
Revision History (Full details and data files)
- Version 1.0: 2018-10-10
Type: Initial release - Version 1.1: 2024-03-27
Changes: Data collection, Database references, Derived calculations, Structure summary
