Download MendeleyCrystal structure of acetolactate decarboxylase from Enterbacter aerogenes
Ji, F., Feng, Y., Mingyang, L.To be published.
6J92
Crystal structure of acetolactate decarboxylase from Enterbacter aerogenes
- PDB DOI: https://doi.org/10.2210/pdb6J92/pdb
- Entry: 6J92 supersedes: 5YHK
- Classification: LYASE
- Organism(s): Klebsiella aerogenes
- Expression System: Escherichia coli BL21
- Mutation(s): No
- Deposited: 2019-01-21 Released: 2020-01-22
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.42 Å
- R-Value Free: 0.218
- R-Value Work: 0.173
- R-Value Observed: 0.175
Starting Model: experimental
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wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Alpha-acetolactate decarboxylase | 238 | Klebsiella aerogenes | Mutation(s): 0 Gene Names: aldC EC: 4.1.1.5 |  | |
UniProt | |||||
Find proteins for P05361 (Klebsiella aerogenes) Explore P05361 Go to UniProtKB: P05361 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P05361 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| ZN Query on ZN | C [auth A], E [auth B] | ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N |  | ||
| CL Query on CL | D [auth A], F [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.42 Å
- R-Value Free: 0.218
- R-Value Work: 0.173
- R-Value Observed: 0.175
- Space Group: P 41 21 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 83.541 | α = 90 |
| b = 83.541 | β = 90 |
| c = 139.173 | γ = 90 |
| Software Name | Purpose |
|---|---|
| PHENIX | refinement |
| HKL-3000 | data reduction |
| HKL-3000 | data scaling |
| PHASER | phasing |
Entry History
Deposition Data
- Released Date: 2020-01-22 Deposition Author(s): Mingyang, L., Song, X., Ji, F., Feng, Y.
- This entry supersedes: 5YHK
Revision History (Full details and data files)
- Version 1.0: 2020-01-22
Type: Initial release - Version 1.1: 2023-11-22
Changes: Data collection, Database references, Refinement description, Structure summary
