Download MendeleyA simple technique to improve microcrystals using gel exclusion of nucleation inducing elements
Blackburn, A., Partowmah, S.H., Brennan, H.M., Mestizo, K.E., Stivala, C.D., Petreczky, J., Perez, A., Horn, A., McSweeney, S.To be published.
6MSX
Iron containing ferritin at 1.43A
- PDB DOI: https://doi.org/10.2210/pdb6MSX/pdb
- Classification: METAL TRANSPORT
- Organism(s): Equus caballus
- Mutation(s): No
- Deposited: 2018-10-18 Released: 2018-12-19
- Funding Organization(s): National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS), Department of Energy (DOE, United States)
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.43 Å
- R-Value Free: 0.172
- R-Value Work: 0.157
- R-Value Observed: 0.158
Starting Model: experimental
View more details
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Ferritin light chain | 174 | Equus caballus | Mutation(s): 0 |  | |
UniProt | |||||
Find proteins for P02791 (Equus caballus) Explore P02791 Go to UniProtKB: P02791 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P02791 | ||||
Sequence AnnotationsExpand | |||||
| |||||
Small Molecules
| Ligands 4 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| CD Query on CD | D [auth A], E [auth A], F [auth A], G [auth A] | CADMIUM ION Cd WLZRMCYVCSSEQC-UHFFFAOYSA-N |  | ||
| SO4 Query on SO4 | B [auth A] | SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L |  | ||
| EDO Query on EDO | C [auth A] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | ||
| NA Query on NA | H [auth A], I [auth A] | SODIUM ION Na FKNQFGJONOIPTF-UHFFFAOYSA-N |  | ||
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.43 Å
- R-Value Free: 0.172
- R-Value Work: 0.157
- R-Value Observed: 0.158
- Space Group: F 4 3 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 181.59 | α = 90 |
| b = 181.59 | β = 90 |
| c = 181.59 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| XDS | data reduction |
| XDS | data scaling |
| MOLREP | phasing |
Entry History & Funding Information
Deposition Data
- Released Date: 2018-12-19 Deposition Author(s): Blackburn, A., Partowmah, S.H., Brennan, H.M., Mestizo, K.E., Stivala, C.D., Petreczky, J., Perez, A., Horn, A., McSweeney, S.
| Funding Organization | Location | Grant Number |
|---|---|---|
| National Institutes of Health/National Institute of General Medical Sciences (NIH/NIGMS) | United States | P41GM111244 |
| Department of Energy (DOE, United States) | United States | KP1605010 |
Revision History (Full details and data files)
- Version 1.0: 2018-12-19
Type: Initial release - Version 1.1: 2019-12-04
Changes: Author supporting evidence - Version 1.2: 2023-10-11
Changes: Data collection, Database references, Derived calculations, Refinement description
