4GG6
Protein complex
Domain Annotation: SCOP2 Classification SCOP2 Database Homepage
Chains | Type | Family Name | Domain Identifier | Family Identifier | Provenance Source (Version) |
---|---|---|---|---|---|
D | SCOP2B Superfamily | MHC antigen-recognition domain | 8034484 | 3000521 | SCOP2B (2022-06-29) |
D | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8055664 | 3000071 | SCOP2B (2022-06-29) |
B | SCOP2B Superfamily | MHC antigen-recognition domain | 8034484 | 3000521 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054679 | 3000071 | SCOP2B (2022-06-29) |
C | SCOP2B Superfamily | MHC antigen-recognition domain | 8041502 | 3000521 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054679 | 3000071 | SCOP2B (2022-06-29) |
A | SCOP2B Superfamily | MHC antigen-recognition domain | 8041502 | 3000521 | SCOP2B (2022-06-29) |
F | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054555 | 3000071 | SCOP2B (2022-06-29) |
H | SCOP2B Superfamily | Immunoglobulin (Ig) domain-like | 8054555 | 3000071 | SCOP2B (2022-06-29) |
Domain Annotation: ECOD Classification ECOD Database Homepage
Chains | Family Name | Domain Identifier | Architecture | Possible Homology | Homology | Topology | Family | Provenance Source (Version) |
---|---|---|---|---|---|---|---|---|
D | C1-set_2 | e4gg6D2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_2 | ECOD (1.6) |
D | MHC_II_beta | e4gg6D3 | A: a+b two layers | X: MHC antigen-recognition domain (From Topology) | H: MHC antigen-recognition domain (From Topology) | T: MHC antigen-recognition domain | F: MHC_II_beta | ECOD (1.6) |
B | C1-set_2 | e4gg6B1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_2 | ECOD (1.6) |
B | MHC_II_beta | e4gg6B2 | A: a+b two layers | X: MHC antigen-recognition domain (From Topology) | H: MHC antigen-recognition domain (From Topology) | T: MHC antigen-recognition domain | F: MHC_II_beta | ECOD (1.6) |
G | DUF1968 | e4gg6G6 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: DUF1968 | ECOD (1.6) |
G | V-set_3 | e4gg6G5 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_3 | ECOD (1.6) |
E | DUF1968 | e4gg6E2 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: DUF1968 | ECOD (1.6) |
E | V-set_3 | e4gg6E1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_3 | ECOD (1.6) |
C | C1-set_2 | e4gg6C1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_2 | ECOD (1.6) |
C | MHC_II_alpha | e4gg6C2 | A: a+b two layers | X: MHC antigen-recognition domain (From Topology) | H: MHC antigen-recognition domain (From Topology) | T: MHC antigen-recognition domain | F: MHC_II_alpha | ECOD (1.6) |
A | C1-set_2 | e4gg6A1 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set_2 | ECOD (1.6) |
A | MHC_II_alpha | e4gg6A2 | A: a+b two layers | X: MHC antigen-recognition domain (From Topology) | H: MHC antigen-recognition domain (From Topology) | T: MHC antigen-recognition domain | F: MHC_II_alpha | ECOD (1.6) |
F | C1-set | e4gg6F3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set | ECOD (1.6) |
F | V-set_3 | e4gg6F4 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_3 | ECOD (1.6) |
H | C1-set | e4gg6H3 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: C1-set | ECOD (1.6) |
H | V-set_3 | e4gg6H4 | A: beta sandwiches | X: Immunoglobulin-like beta-sandwich | H: Immunoglobulin-related | T: Immunoglobulin/Fibronectin type III/E set domains/PapD-like | F: V-set_3 | ECOD (1.6) |
Domain Annotation: CATH CATH Database Homepage
IMGT Antibody Annotation IMGT Database Homepage
Chain | Protein Name | Description | Organism Name | Gene Allele Name(s) | Domain Name(s) | Receptor Type | Receptor Description | Provenance Source |
---|---|---|---|---|---|---|---|---|
MH2 HLA-DQA1*0301, peptide fused to N-terminus of | PEPTIDE-II-BETA | Homo sapiens (human) | HLA-DQB1*0302 | G-DOMAIN G-BETA, C-LIKE-DOMAIN C-LIKE | MH | MH2-ALPHA_PEPTIDE-BETA | IMGT (202449-0) | |
G-BETA_HLA-DBQ1*0302 | TR-ALPHA | Homo sapiens (human) | TRAV26-2*01, TRAJ45*01, TRAC*01 | V-DOMAIN V-ALPHA, C-DOMAIN C-ALPHA | TR | TR-ALPHA_BETA-2 | IMGT (202449-0) | |
MH2 HLA-DQA1*0301, peptide fused to N-terminus of | II-ALPHA | Homo sapiens (human) | HLA-DQA1*0301 | G-DOMAIN G-ALPHA, C-LIKE-DOMAIN C-LIKE | MH | MH2-ALPHA_PEPTIDE-BETA | IMGT (202449-0) | |
G-BETA_HLA-DBQ1*0302 | TR-BETA-2 | Homo sapiens (human) | TRBV9*01, TRBV9*03, TRBJ2-7*01, TRBC2*01, TRBC2*02 | V-DOMAIN V-BETA, C-DOMAIN C-BETA-2 | TR | TR-ALPHA_BETA-2 | IMGT (202449-0) |
Protein Family Annotation Pfam Database Homepage
Chains | Accession | Name | Description | Comments | Source |
---|---|---|---|---|---|
PF00969 | Class II histocompatibility antigen, beta domain (MHC_II_beta) | Class II histocompatibility antigen, beta domain | - | Domain | |
PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | - | Domain | |
PF07686 | Immunoglobulin V-set domain (V-set) | Immunoglobulin V-set domain | This domain is found in antibodies as well as neural protein P0 and CTL4 amongst others. | Domain | |
PF09291 | Domain of unknown function (DUF1968) (DUF1968) | Domain of unknown function (DUF1968) | Members of this family are found in mammalian T-cell antigen receptor, and adopt an immunoglobulin-like beta-sandwich fold, with seven strands in two beta-sheets in a Greek-key topology. Their exact function has not, as yet, been determined. | Domain | |
PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | - | Domain | |
PF00993 | Class II histocompatibility antigen, alpha domain (MHC_II_alpha) | Class II histocompatibility antigen, alpha domain | - | Domain | |
PF07654 | Immunoglobulin C1-set domain (C1-set) | Immunoglobulin C1-set domain | - | Domain | |