RCSB PDB: Search

Warning You are using a web browser that we do not support. Our website will not work properly. Please update to a newer version or download a new web browser, such as Chrome or Firefox.

Help

Help

RCSB PDB

Deposit
- PDBx/mmCIF file
- pdb_extract
- SF-Tool
- Ligand Expo
- MAXIT
- Validation Server
- Validation API
- Information for Journals
- Validation Task Forces
- wwPDB OneDep System
- PDB-IHM
Search
Visualize
Analyze
Download
Learn
- Training Courses
- Guide to PDB Data
- Molecule of the Month
- Educational Resources
- Curricula
- Browse
- News
- SciArt Galleries
- Irving Geis
- David Goodsell
About
Careers
COVID-19

233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

	Include CSM
Advanced Search \| Browse Annotations		Help

Search
Query History
Browse Annotations
MyPDB

QUERY: Citation Author = "Mulichak, A.M."

MyPDB Login

Search API

Advanced Search Query Builder

Help

Full Text

Structure Attributes

Help

NOT

Count

Add Subquery

Chemical Attributes

Sequence Similarity

Sequence Motif

Structure Similarity

Structure Motif

Chemical Similarity

Return

grouped by

Include Computed Structure Models (CSM)

Count

Clear

Search Summary

This query matches 40 Structures.

Refinements

Structure Determination Methodology

experimental (40)

Scientific Name of Source Organism

	Homo sapiens (10)
	Human immunodeficiency virus 2 (8)
	Amycolatopsis orientalis (4)
	Arabidopsis thaliana (3)
	Ovis aries (3)
	Equus caballus (2)
	Hirudo medicinalis (2)
	Human immunodeficiency virus 1 (2)
	Thaumatococcus daniellii (2)
	Bos taurus (1)

More...

Taxonomy

	Eukaryota (23)
	Riboviria (10)
	Bacteria (8)
	Eukaryota (eukaryotes) (1)

Experimental Method

X-RAY DIFFRACTION (40)

Polymer Entity Type

Protein (40)

Refinement Resolution (Å)

	1.0 - 1.5 (2)
	1.5 - 2.0 (11)
	2.0 - 2.5 (11)
	2.5 - 3.0 (10)
	3.0 - 3.5 (6)

Release Date

	1990 - 1994 (10)
	1995 - 1999 (11)
	2000 - 2004 (11)
	2005 - 2009 (3)
	2010 - 2014 (5)

Enzyme Classification Name

	Hydrolases (16)
	Oxidoreductases (6)
	Transferases (7)
	Lyases (3)
	Ligases (1)

Symmetry Type

	Asymmetric (24)
	Cyclic (14)
	Dihedral (6)

SCOP Classification

	All beta proteins (16)
	Alpha and beta proteins (a/b) (12)
	Small proteins (10)
	All alpha proteins (5)
	Artifacts (2)
	Alpha and beta proteins (a+b) (1)
	Multi-domain proteins (alpha and beta) (1)

AllSelected

1 to 25 of 40 Structures

Page 1 of 2

Sort by

Explore in 3D

1AHT \| pdb_00001aht	Download File View File

CRYSTAL STRUCTURE OF HUMAN ALPHA-THROMBIN COMPLEXED WITH HIRUGEN AND P-AMIDINOPHENYLPYRUVATE AT 1.6 ANGSTROMS RESOLUTION

Chen, Z.

(1995) Arch Biochem Biophys 322: 198-203

Released	1996-03-17
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	ALPHA-THROMBIN (LARGE SUBUNIT) (protein) ALPHA-THROMBIN (SMALL SUBUNIT) (protein) HIRUGEN (protein)
Unique Ligands	APA

Explore in 3D

1BDG \| pdb_00001bdg	Download File View File

HEXOKINASE FROM SCHISTOSOMA MANSONI COMPLEXED WITH GLUCOSE

Mulichak, A.M., Garavito, R.M.

(1998) Nat Struct Biol 5: 555-560

Released	1999-05-11
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Schistosoma mansoni
Macromolecule	HEXOKINASE (protein)
Unique Ligands	GLC, SO4

Explore in 3D

1BG3 \| pdb_00001bg3	Download File View File

RAT BRAIN HEXOKINASE TYPE I COMPLEX WITH GLUCOSE AND INHIBITOR GLUCOSE-6-PHOSPHATE

Mulichak, A.M., Garavito, R.M.

(1998) Nat Struct Biol 5: 555-560

Released	1999-06-08
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Rattus norvegicus
Macromolecule	HEXOKINASE (protein)
Unique Ligands	BGC, CA, G6P

Explore in 3D

1FE2 \| pdb_00001fe2	Download File View File

CRYSTAL STRUCTURE OF DIHOMO-GAMMA-LINOLEIC ACID BOUND IN THE CYCLOOXYGENASE CHANNEL OF PROSTAGLANDIN ENDOPEROXIDE H SYNTHASE-1.

Thuresson, E.D., Malkowski, M.G., Lakkides, K.M., Smith, W.L., Garavito, R.M.

(2001) J Biological Chem 276: 10358-10365

Released	2001-05-02
Method	X-RAY DIFFRACTION 3 Å
Organisms	Ovis aries
Macromolecule	PROSTAGLANDIN ENDOPEROXIDE H SYNTHASE-1 (protein)
Unique Ligands	BOG, COH, LAX
Unique branched monosaccharides	BMA, NAG

Explore in 3D

1I5K \| pdb_00001i5k	Download File View File

STRUCTURE AND BINDING DETERMINANTS OF THE RECOMBINANT KRINGLE-2 DOMAIN OF HUMAN PLASMINOGEN TO AN INTERNAL PEPTIDE FROM A GROUP A STREPTOCOCCAL SURFACE PROTEIN

Rios-Steiner, J.L., Schenone, M., Mochalkin, I., Tulinsky, A., Castellino, F.J.

(2001) J Mol Biology 308: 705-719

Released	2001-08-01
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Homo sapiens Streptococcus pyogenes
Macromolecule	M PROTEIN (protein) PLASMINOGEN (protein)

Explore in 3D

1IGX \| pdb_00001igx	Download File View File

Crystal Structure of Eicosapentanoic Acid Bound in the Cyclooxygenase Channel of Prostaglandin Endoperoxide H Synthase-1.

Malkowski, M.G., Thuresson, E.D., Smith, W.L., Garavito, R.M.

(2001) J Biological Chem 276: 37547-37555

Released	2001-12-12
Method	X-RAY DIFFRACTION 3.1 Å
Organisms	Ovis aries
Macromolecule	Prostaglandin Endoperoxide H Synthase-1 (protein)
Unique Ligands	BGC, BOG, COH, EPA
Unique branched monosaccharides	BMA, MAN, NAG, NDG

Explore in 3D

1IGZ \| pdb_00001igz	Download File View File

Crystal Structure of Linoleic acid Bound in the Cyclooxygenase Channel of Prostaglandin Endoperoxide H Synthase-1.

Malkowski, M.G., Thuresson, E.D., Smith, W.L., Garavito, R.M.

(2001) J Biological Chem 276: 37547-37555

Released	2001-12-12
Method	X-RAY DIFFRACTION 2.9 Å
Organisms	Ovis aries
Macromolecule	Prostaglandin Endoperoxide H Synthase-1 (protein)
Unique Ligands	BGC, BOG, COH, EIC
Unique branched monosaccharides	BMA, MAN, NAG, NDG

Explore in 3D

1IIR \| pdb_00001iir	Download File View File

Crystal Structure of UDP-glucosyltransferase GtfB

Mulichak, A.M., Losey, H.C., Walsh, C.T., Garavito, R.M.

(2001) Structure 9: 547-557

Released	2001-07-18
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Amycolatopsis orientalis
Macromolecule	glycosyltransferase GtfB (protein)
Unique Ligands	MG, SO4

Explore in 3D

1IVP \| pdb_00001ivp	Download File View File

THE CRYSTALLOGRAPHIC STRUCTURE OF THE PROTEASE FROM HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 WITH TWO SYNTHETIC PEPTIDIC TRANSITION STATE ANALOG INHIBITORS

Mulichak, A.M., Watenpaugh, K.D.

(1993) J Biological Chem 268: 13103-13109

Released	1993-07-15
Method	X-RAY DIFFRACTION 2.5 Å
Organisms	Human immunodeficiency virus 2
Macromolecule	HIV-2 PROTEASE (protein)
Unique Ligands	1ZK

Explore in 3D

1IVQ \| pdb_00001ivq	Download File View File

THE CRYSTALLOGRAPHIC STRUCTURE OF THE PROTEASE FROM HUMAN IMMUNODEFICIENCY VIRUS TYPE 2 WITH TWO SYNTHETIC PEPTIDIC TRANSITION STATE ANALOG INHIBITORS

Mulichak, A.M., Watenpaugh, K.D.

(1993) J Biological Chem 268: 13103-13109

Released	1993-07-15
Method	X-RAY DIFFRACTION 2.6 Å
Organisms	Human immunodeficiency virus 2
Macromolecule	HIV-2 PROTEASE (protein)
Unique Ligands	0PX

Explore in 3D

1N7G \| pdb_00001n7g	Download File View File

Crystal Structure of the GDP-mannose 4,6-dehydratase ternary complex with NADPH and GDP-rhamnose.

Mulichak, A.M., Bonin, C.P., Reiter, W.-D., Garavito, R.M.

(2002) Biochemistry 41: 155578-155589

Released	2003-01-07
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Arabidopsis thaliana
Macromolecule	GDP-D-mannose-4,6-dehydratase (protein)
Unique Ligands	GDR, NDP

Explore in 3D

1N7H \| pdb_00001n7h	Download File View File

Crystal Structure of GDP-mannose 4,6-dehydratase ternary complex with NADPH and GDP

Mulichak, A.M., Bonin, C.P., Reiter, W.-D., Garavito, R.M.

(2002) Biochemistry 41: 15578-15589

Released	2003-01-07
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Arabidopsis thaliana
Macromolecule	GDP-D-mannose-4,6-dehydratase (protein)
Unique Ligands	GDP, NDP

Explore in 3D

1PK4 \| pdb_00001pk4	Download File View File

CRYSTAL AND MOLECULAR STRUCTURE OF HUMAN PLASMINOGEN KRINGLE 4 REFINED AT 1.9-ANGSTROMS RESOLUTION

Tulinsky, A., Mulichak, A.M.

(1991) Biochemistry 30: 10576-10588

Released	1993-10-31
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Homo sapiens
Macromolecule	PLASMINOGEN KRINGLE 4 (protein)
Unique Ligands	SO4

Explore in 3D

1PMK \| pdb_00001pmk	Download File View File

KRINGLE-KRINGLE INTERACTIONS IN MULTIMER KRINGLE STRUCTURES

Padmanabhan, K., Tulinsky, A.

(1994) Protein Sci 3: 898-910

Released	1994-06-22
Method	X-RAY DIFFRACTION 2.25 Å
Organisms	Homo sapiens
Macromolecule	PLASMINOGEN KRINGLE 4 (protein)

Explore in 3D

1PML \| pdb_00001pml	Download File View File

KRINGLE-KRINGLE INTERACTIONS IN MULTIMER KRINGLE STRUCTURES

Padmanabhan, K., Tulinsky, A.

(1994) Protein Sci 3: 898-910

Released	1994-06-22
Method	X-RAY DIFFRACTION 2.38 Å
Organisms	Homo sapiens
Macromolecule	TISSUE PLASMINOGEN ACTIVATOR KRINGLE 2 (protein)
Unique Ligands	CL

Explore in 3D

1PN3 \| pdb_00001pn3	Download File View File

Crystal Structure of TDP-epi-Vancosaminyltransferase GtfA in complexes with TDP and the acceptor substrate DVV.

Mulichak, A.M., Losey, H.C., Lu, W., Wawrzak, Z., Walsh, C.T., Garavito, R.M.

(2003) Proc Natl Acad Sci U S A 100: 9238

Released	2003-08-12
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Amycolatopsis orientalis
Macromolecule	DESVANCOSAMINYL VANCOMYCIN (protein) GLYCOSYLTRANSFERASE GTFA (protein)
Unique Ligands	BGC, TYD

Explore in 3D

1PNV \| pdb_00001pnv	Download File View File

Crystal Structure of TDP-epi-Vancosaminyltransferase GtfA in complexes with TDP and Vancomycin

Mulichak, A.M., Losey, H.C., Lu, W., Wawrzak, Z., Walsh, C.T., Garavito, R.M.

(2003) Proc Natl Acad Sci U S A 100: 9238

Released	2003-08-12
Method	X-RAY DIFFRACTION 2.8 Å
Organisms	Amycolatopsis orientalis
Macromolecule	GLYCOSYLTRANSFERASE GTFA (protein) VANCOMYCIN (protein)
Unique Ligands	TYD
Unique branched monosaccharides	BGC, RER

Explore in 3D

1QRR \| pdb_00001qrr	Download File View File

CRYSTAL STRUCTURE OF SQD1 PROTEIN COMPLEX WITH NAD AND UDP-GLUCOSE

Mulichak, A.M., Theisen, M.J., Essigmann, B., Benning, C., Garavito, R.M.

(1999) Proc Natl Acad Sci U S A 96: 13097-13102

Released	1999-11-10
Method	X-RAY DIFFRACTION 1.6 Å
Organisms	Arabidopsis thaliana
Macromolecule	sulfolipid biosynthesis (SQD1) PROTEIN (protein)
Unique Ligands	NAD, SO4, UPG

Explore in 3D

1RPN \| pdb_00001rpn	Download File View File

Crystal Structure of GDP-D-mannose 4,6-dehydratase in complexes with GDP and NADPH

Webb, N.A., Mulichak, A.M., Lam, J.S., Rocchetta, H.L., Garavito, R.M.

(2004) Protein Sci 13: 529-539

Released	2004-02-24
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Pseudomonas aeruginosa
Macromolecule	GDP-mannose 4,6-dehydratase (protein)
Unique Ligands	GDP, NDP

Explore in 3D

1RRV \| pdb_00001rrv	Download File View File

X-ray crystal structure of TDP-vancosaminyltransferase GtfD as a complex with TDP and the natural substrate, desvancosaminyl vancomycin.

Mulichak, A.M., Lu, W., Losey, H.C., Walsh, C.T., Garavito, R.M.

(2004) Biochemistry 43: 5170

Released	2004-05-18
Method	X-RAY DIFFRACTION 2 Å
Organisms	Amycolatopsis orientalis
Macromolecule	DESVANCOSAMINYL VANCOMYCIN (protein) GLYCOSYLTRANSFERASE GTFD (protein)
Unique Ligands	BGC, GOL, K, TYD

Explore in 3D

1TA9 \| pdb_00001ta9	Download File View File

Crystal structure of glycerol dehydrogenase from Schizosaccharomyces pombe

Mulichak, A.M.

To be published

Released	2005-08-16
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Schizosaccharomyces pombe
Macromolecule	glycerol dehydrogenase (protein)
Unique Ligands	ALA, GOL, K, ZN

Explore in 3D

1TOM \| pdb_00001tom	Download File View File

ALPHA-THROMBIN COMPLEXED WITH HIRUGEN

Chen, Z.

(1997) Bioorg Med Chem Lett 7: 67-72

Released	1997-03-12
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Hirudo medicinalis Homo sapiens
Macromolecule	ALPHA-THROMBIN (protein) HIRUGEN (protein)
Unique Ligands	MIN

Explore in 3D

1UPJ \| pdb_00001upj	Download File View File

HIV-1 PROTEASE COMPLEX WITH U095438 [3-[1-(4-BROMOPHENYL) ISOBUTYL]-4-HYDROXYCOUMARIN

Watenpaugh, K.D., Mulichak, A.M., Janakiraman, M.N.

(1995) J Med Chem 38: 3624-3637

Released	1996-10-14
Method	X-RAY DIFFRACTION 2.22 Å
Organisms	Human immunodeficiency virus 1
Macromolecule	HIV-1 PROTEASE (protein)
Unique Ligands	U01

Explore in 3D

2GQF \| pdb_00002gqf	Download File View File

Crystal structure of flavoprotein HI0933 from Haemophilus influenzae Rd

Mulichak, A.M., Patskovsky, Y., Keefe, L.J., Almo, S.C., Burley, S.K., New York SGX Research Center for Structural Genomics (NYSGXRC)

To be published

Released	2006-05-30
Method	X-RAY DIFFRACTION 2.7 Å
Organisms	Haemophilus influenzae
Macromolecule	Hypothetical protein HI0933 (protein)
Unique Ligands	FAD, SO4

Explore in 3D

2HPE \| pdb_00002hpe	Download File View File

COMPARISON OF THE STRUCTURES OF HIV-2 PROTEASE COMPLEXES IN THREE CRYSTAL SPACE GROUPS WITH AN HIV-1 PROTEASE COMPLEX STRUCTURE

Mulichak, A.M., Watenpaugh, K.D.

To be published

Released	1994-10-15
Method	X-RAY DIFFRACTION 2 Å
Organisms	Human immunodeficiency virus 2
Macromolecule	HIV-2 PROTEASE (protein) UNIDENTIFIED PEPTIDE FRAGMENT (protein)

1 to 25 of 40 Structures

Page 1 of 2

Sort by

About
About Us
Citing Us
Publications
Team
Careers
Usage & Privacy

Support
Contact Us
Help
Website FAQ
Glossary
Service Status

RCSB PDB is hosted by

RCSB PDB is a member of the

RCSB Partners
Nucleic Acid Knowledgebase

wwPDB Partners
RCSB PDB
PDBe
PDBj
BMRB
EMDB

RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

Prepare Data

Validate Data

Deposit Data

Help and Resources

Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

1AHT | pdb_00001aht

1BDG | pdb_00001bdg

1BG3 | pdb_00001bg3

1FE2 | pdb_00001fe2

1I5K | pdb_00001i5k

1IGX | pdb_00001igx

1IGZ | pdb_00001igz

1IIR | pdb_00001iir

1IVP | pdb_00001ivp

1IVQ | pdb_00001ivq

1N7G | pdb_00001n7g

1N7H | pdb_00001n7h

1PK4 | pdb_00001pk4

1PMK | pdb_00001pmk

1PML | pdb_00001pml

1PN3 | pdb_00001pn3

1PNV | pdb_00001pnv

1QRR | pdb_00001qrr

1RPN | pdb_00001rpn

1RRV | pdb_00001rrv

1TA9 | pdb_00001ta9

1TOM | pdb_00001tom

1UPJ | pdb_00001upj

2GQF | pdb_00002gqf

2HPE | pdb_00002hpe