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233,605 Structures from the PDB

1,068,577 Computed Structure Models (CSM)

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QUERY: Citation Author = "Whisstock, J.C."

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Search Summary

This query matches 15 Structures.

Refinements

Structure Determination Methodology

experimental (15)

Scientific Name of Source Organism

	Escherichia coli (4)
	Enterococcus faecalis V583 (3)
	Bacillus cereus (1)
	Bacillus cereus ATCC 14579 (1)
	Bacillus subtilis (1)
	Bacteroides thetaiotaomicron VPI-5482 (1)
	Salmonella enterica subsp. enterica serovar Typhimurium (1)
	Shigella flexneri (1)
	Shigella flexneri 2a str. 2457T (1)
	Streptococcus pneumoniae TIGR4 (1)

Taxonomy

Bacteria (15)

Experimental Method

X-RAY DIFFRACTION (15)

Polymer Entity Type

Protein (15)

Refinement Resolution (Å)

	1.5 - 2.0 (6)
	2.0 - 2.5 (7)
	2.5 - 3.0 (1)
	3.0 - 3.5 (1)

Release Date

	2005 - 2009 (14)
	2010 - 2014 (1)

Enzyme Classification Name

	Transferases (2)
	Oxidoreductases (1)

Symmetry Type

	Asymmetric (7)
	Cyclic (7)
	Dihedral (5)

SCOP Classification

	Alpha and beta proteins (a/b) (7)
	Artifacts (5)
	All alpha proteins (3)
	Alpha and beta proteins (a+b) (2)
	Multi-domain proteins (alpha and beta) (1)

AllSelected

1 to 15 of 15 Structures

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2FZV \| pdb_00002fzv	Download File View File

Crystal Structure of an apo form of a Flavin-binding Protein from Shigella flexneri

Vorontsov, I.I., Minasov, G., Brunzelle, J.S., Shuvalova, L., Collart, F.R., Joachimiak, A., Anderson, W.F., Midwest Center for Structural Genomics (MCSG)

(2007) Protein Sci 16: 2483-2490

Released	2006-02-21
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Shigella flexneri 2a str. 2457T
Macromolecule	putative arsenical resistance protein (protein)
Unique Ligands	CA, CL

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2GJV \| pdb_00002gjv	Download File View File

Crystal Structure of a Protein of Unknown Function from Salmonella typhimurium

Minasov, G., Shuvalova, L., Brunzelle, J.S., Vorontsov, I.I., Collart, F.R., Joachimiak, A., Anderson, W.F., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2006-04-11
Method	X-RAY DIFFRACTION 2.39 Å
Organisms	Salmonella enterica subsp. enterica serovar Typhimurium
Macromolecule	putative cytoplasmic protein (protein)
Unique Ligands	CA, CL

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2GX8 \| pdb_00002gx8	Download File View File

The Crystal Structure of Bacillus cereus protein related to NIF3

Minasov, G., Brunzelle, J.S., Shuvalova, L., Vorontsov, I.I., Collart, F.R., Joachimiak, A., Anderson, W.F., Midwest Center for Structural Genomics (MCSG)

(2007) Protein Sci 16: 1285-1293

Released	2006-05-16
Method	X-RAY DIFFRACTION 2.2 Å
Organisms	Bacillus cereus ATCC 14579
Macromolecule	NIF3-related protein (protein)
Unique Ligands	EPE, TRS, ZN

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2I0Z \| pdb_00002i0z	Download File View File

Crystal structure of a FAD binding protein from Bacillus cereus, a putative NAD(FAD)-utilizing dehydrogenases

Minasov, G., Shuvalova, L., Vorontsov, I.I., Kiryukhina, O., Abdullah, J., Collart, F.R., Joachimiak, A., Anderson, W.F., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2006-08-22
Method	X-RAY DIFFRACTION 1.84 Å
Organisms	Bacillus cereus
Macromolecule	NAD(FAD)-utilizing dehydrogenases (protein)
Unique Ligands	CL, FAD

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2O6I \| pdb_00002o6i	Download File View File

Structure of an Enterococcus Faecalis HD Domain Phosphohydrolase

Vorontsov, I.I., Minasov, G., Shuvalova, L., Brunzelle, J.S., Moy, S., Collart, F.R., Joachimiak, A., Anderson, W.F., Midwest Center for Structural Genomics (MCSG)

(2011) J Biological Chem 286: 33158-33166

Released	2006-12-19
Method	X-RAY DIFFRACTION 2.55 Å
Organisms	Enterococcus faecalis V583
Macromolecule	HD domain protein (protein)
Unique Ligands	CL, HED, ZN

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2OKQ \| pdb_00002okq	Download File View File

Crystal structure of unknown conserved ybaA protein from Shigella flexneri

Minasov, G., Vorontsov, I.I., Shuvalova, L., Brunzelle, J.S., Kiryukhina, O., Collart, F.R., Joachimiak, A., Anderson, W.F., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2007-02-06
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Shigella flexneri
Macromolecule	Hypothetical protein ybaA (protein)
Unique Ligands	NA

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2OMK \| pdb_00002omk	Download File View File

Structure of the Bacteroides Thetaiotaomicron Thiamin Pyrophosphokinase

Vorontsov, I.I., Minasov, G., Shuvalova, L., Abdullah, J., Collart, F.R., Joachimiak, A., Anderson, W.F., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2007-02-06
Method	X-RAY DIFFRACTION 1.8 Å
Organisms	Bacteroides thetaiotaomicron VPI-5482
Macromolecule	Hypothetical protein (protein)

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2POK \| pdb_00002pok	Download File View File

Crystal structure of a M20 family metallo peptidase from Streptococcus pneumoniae

Minasov, G., Shuvalova, L., Brunzelle, J.S., Vorontsov, I.I., Kiryukhina, O., Collart, F.R., Joachimiak, A., Anderson, W.F., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2007-05-08
Method	X-RAY DIFFRACTION 1.9 Å
Organisms	Streptococcus pneumoniae TIGR4
Macromolecule	Peptidase, M20/M25/M40 family (protein)
Unique Ligands	BGC, MN

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2PR1 \| pdb_00002pr1	Download File View File

Crystal structure of the Bacillus subtilis N-acetyltransferase YlbP protein in complex with Coenzyme-A

Minasov, G., Shuvalova, L., Kiryukhina, O., Vorontsov, I.I., Collart, F.R., Joachimiak, A., Anderson, W.F., Midwest Center for Structural Genomics (MCSG)

To be published

Released	2007-05-15
Method	X-RAY DIFFRACTION 3.2 Å
Organisms	Bacillus subtilis
Macromolecule	Uncharacterized N-acetyltransferase ylbP (protein)
Unique Ligands	CO, COA, SO4
Unique branched monosaccharides	FRU, GLC

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2PRS \| pdb_00002prs	Download File View File

Structure and metal binding properties of ZnuA, a periplasmic zinc transporter from Escherichia coli

Yatsunyk, L.A., Kim, L.R., Vorontsov, I.I., Rosenzweig, A.C.

(2008) J Biol Inorg Chem 13: 271-288

Released	2007-06-05
Method	X-RAY DIFFRACTION 1.7 Å
Organisms	Escherichia coli
Macromolecule	High-affinity zinc uptake system protein znuA (protein)
Unique Ligands	IPA, ZN

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2PS0 \| pdb_00002ps0	Download File View File

Structure and metal binding properties of ZnuA, a periplasmic zinc transporter from Escherichia coli

Yatsunyk, L.A., Kim, L.R., Vorontsov, I.I., Rosenzweig, A.C.

(2008) J Biol Inorg Chem 13: 271-288

Released	2007-06-05
Method	X-RAY DIFFRACTION 2 Å
Organisms	Escherichia coli
Macromolecule	High-affinity zinc uptake system protein znuA (protein)
Unique Ligands	ZN

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2PS3 \| pdb_00002ps3	Download File View File

Structure and metal binding properties of ZnuA, a periplasmic zinc transporter from Escherichia coli

Yatsunyk, L.A., Kim, L.R., Vorontsov, I.I., Rosenzweig, A.C.

(2008) J Biol Inorg Chem 13: 271-288

Released	2007-06-05
Method	X-RAY DIFFRACTION 2.47 Å
Organisms	Escherichia coli
Macromolecule	High-affinity zinc uptake system protein znuA (protein)

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2PS9 \| pdb_00002ps9	Download File View File

Structure and metal binding properties of ZnuA, a periplasmic zinc transporter from Escherichia coli

Yatsunyk, L.A., Kim, L.R., Vorontsov, I.I., Rosenzweig, A.C.

(2008) J Biol Inorg Chem 13: 271-288

Released	2007-06-05
Method	X-RAY DIFFRACTION 2.15 Å
Organisms	Escherichia coli
Macromolecule	High-affinity zinc uptake system protein znuA (protein)
Unique Ligands	CO

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3IRH \| pdb_00003irh	Download File View File

Structure of an Enterococcus Faecalis HD-domain protein complexed with dGTP and dATP

Vorontsov, I.I., Minasov, G., Shuvalova, L., Brunzelle, J.S., Joachimiak, A., Anderson, W.F., Midwest Center for Structural Genomics (MCSG)

(2011) J Biological Chem 286: 33158-33166

Released	2009-09-22
Method	X-RAY DIFFRACTION 2.4 Å
Organisms	Enterococcus faecalis V583
Macromolecule	HD domain protein (protein)
Unique Ligands	CA, DGT, DTP

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4LRL \| pdb_00004lrl	Download File View File

Structure of an Enterococcus Faecalis HD-domain protein complexed with dGTP and dTTP

Vorontsov, I.I., Minasov, G., Shuvalova, L., Joachimiak, A., Anderson, W.F., Midwest Center for Structural Genomics (MCSG)

(2014) J Biological Chem 289: 2815-2824

Released	2013-11-20
Method	X-RAY DIFFRACTION 2.35 Å
Organisms	Enterococcus faecalis V583
Macromolecule	HD domain protein (protein)
Unique Ligands	DGT, MLI, NI, TRS, TTP

1 to 15 of 15 Structures

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729.

2FZV | pdb_00002fzv

Crystal Structure of an apo form of a Flavin-binding Protein from Shigella flexneri

2GJV | pdb_00002gjv

Crystal Structure of a Protein of Unknown Function from Salmonella typhimurium

2GX8 | pdb_00002gx8

The Crystal Structure of Bacillus cereus protein related to NIF3

2I0Z | pdb_00002i0z

Crystal structure of a FAD binding protein from Bacillus cereus, a putative NAD(FAD)-utilizing dehydrogenases

2O6I | pdb_00002o6i

Structure of an Enterococcus Faecalis HD Domain Phosphohydrolase

2OKQ | pdb_00002okq

Crystal structure of unknown conserved ybaA protein from Shigella flexneri

2OMK | pdb_00002omk

Structure of the Bacteroides Thetaiotaomicron Thiamin Pyrophosphokinase

2POK | pdb_00002pok

Crystal structure of a M20 family metallo peptidase from Streptococcus pneumoniae

2PR1 | pdb_00002pr1

Crystal structure of the Bacillus subtilis N-acetyltransferase YlbP protein in complex with Coenzyme-A

2PRS | pdb_00002prs

Structure and metal binding properties of ZnuA, a periplasmic zinc transporter from Escherichia coli

2PS0 | pdb_00002ps0

Structure and metal binding properties of ZnuA, a periplasmic zinc transporter from Escherichia coli

2PS3 | pdb_00002ps3

Structure and metal binding properties of ZnuA, a periplasmic zinc transporter from Escherichia coli

2PS9 | pdb_00002ps9

Structure and metal binding properties of ZnuA, a periplasmic zinc transporter from Escherichia coli

3IRH | pdb_00003irh

Structure of an Enterococcus Faecalis HD-domain protein complexed with dGTP and dATP

4LRL | pdb_00004lrl

Structure of an Enterococcus Faecalis HD-domain protein complexed with dGTP and dTTP

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Structure Determination Methodology

Scientific Name of Source Organism

Taxonomy

Experimental Method

Polymer Entity Type

Refinement Resolution (Å)

Release Date

Enzyme Classification Name

Symmetry Type

SCOP Classification

2FZV | pdb_00002fzv

2GJV | pdb_00002gjv

2GX8 | pdb_00002gx8

2I0Z | pdb_00002i0z

2O6I | pdb_00002o6i

2OKQ | pdb_00002okq

2OMK | pdb_00002omk

2POK | pdb_00002pok

2PR1 | pdb_00002pr1

2PRS | pdb_00002prs

2PS0 | pdb_00002ps0

2PS3 | pdb_00002ps3

2PS9 | pdb_00002ps9

3IRH | pdb_00003irh

4LRL | pdb_00004lrl